Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270393	Mfap1	microfibrillar-associated protein 1	2		67532
Gene Ontology	extracellular matrix | extracellular matrix structural constituent
Human Homolog	MFAP1[microfibrillar-associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 162 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCTTCAGTCC (2) GAGGTGGAAG (2) GATGAGGATG GGCATCCTGG (3) GTTCTTGTAT TAATAAATAA (2) TGGTTGCTGG 316.5 0.3165 Cb medulloblastoma AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCACGGTTTT GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 968.8 0.9688 P8 GC+1d culture AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCTTCAGTCC (2) GAGGTGGAAG (2) GGCATCCTGG (3) GTGGCAGACA GTTCTTGTAT TAATAAATAA (2) TGGTTGCTGG 329.9 0.3299 P8 GC+SHH+1d culture AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCACGGTTTT CCTTCAGTCC (2) GAGGTGGAAG (2) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 447.4 0.4474 3T3 fibroblasts AAAAAAAAAA (2) GAGGTGGAAG (2) GATGAGGATG GTGGCAGACA TGGTTGCTGG 259.3 0.2593 E15 cortex AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCACGGTTTT GAGGTGGAAG (2) GATGAGGATG GGCATTTCCT GGGCCAAGAG (2) GTGGCAGACA TGGTTGCTGG 539.1 0.5391 P1 cortex AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) GTTCTTGTAT TGGTTGCTGG 349.9 0.3499 Hypothalamus AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CAGAGTCAGA CCAAGTGTTC (2) CCACGGTTTT GAGGTGGAAG (2) GATGAGGATG GGCATTTCCT GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 541.5 0.5415 E12.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCAAGTGTTC (2) CCTTCAGTCC (2) GAGGTGGAAG (2) TAATAAATAA (2) TGGTTGCTGG 369.8 0.3698 E14.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) TAATAAATAA (2) TGGTTGCTGG 1107.7 1.1077 E16.5 retina AAAAAAAAAA (2) AGATGTATTT (2) CAGAGTCAGA CCACGGTTTT GAAGTGGGAA (3) GAGGTGGAAG (2) GGGCCAAGAG (2) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 871 0.871 E18.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) GAGGTGGAAG (2) TAATAAATAA (2) TGGTTGCTGG 743.9 0.7439 P0.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCACGGTTTT CCTTCAGTCC (2) GAGGTGGAAG (2) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 365.2 0.3652 P2.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CAGAGTCAGA CCAAGTGTTC (2) CCTTCAGTCC (2) GAGGTGGAAG (2) GATGAGGATG TAATAAATAA (2) TGGTTGCTGG 603.7 0.6037 P4.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) GAGGTGGAAG (2) GGCATCCTGG (3) GGGCCAAGAG (2) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 539 0.539 P6.5 retina AAAAAAAAAA (2) AGATGTATTT (2) CCAAGTGTTC (2) CCTTCAGTCC (2) GAGGTGGAAG (2) GATGAGGATG TAATAAATAA (2) TGGTTGCTGG 505.3 0.5053 P10.5 crx- retina AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCAAGTGTTC (2) TAATAAATAA (2) TGGTTGCTGG 351.1 0.3511 P10.5 crx+ retina AAAAAAAAAA (2) AGATGTATTT (2) CCACGGTTTT CCTTCAGTCC (2) GAAGTGGGAA (3) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 226.8 0.2268 Adult retinal AAAAAAAAAA (2) AAAAACAAAA (2) CCACGGTTTT GAGGTGGAAG (2) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 290.9 0.2909 ONL AAAAAAAAAA (2) AAAAACAAAA (2) AGATGTATTT (2) CCACGGTTTT CCTTCAGTCC (2) GTGGCAGACA TAATAAATAA (2) TGGTTGCTGG 543.9 0.5439