| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGCTCCTG (2) CAGTTATAAA (5) GCTCACAAGA (2) GCTCCTGTAT (2) TCACTACCTC TGTTCCCAAG (2) TTTAAACTCT (2)
| 40.6 | 0.0406 |
| Cb medulloblastoma | CAGTTATAAA (5) GCTCACAAGA (2) GCTCCTGTAT (2) TCACTACCTC
| 120.2 | 0.1202 |
| P8 GC+1d culture | AAGGCTCCTG (2) CAGTTATAAA (5) CTCAAGGCCC (3) GCTCCTGTAT (2) TCACTACCTC TGTTCCCAAG (2) TTTAAACTCT (2)
| 65 | 0.065 |
| P8 GC+SHH+1d culture | AAGGCTCCTG (2) CAGTTATAAA (5) GCTCACAAGA (2) GCTCCTGTAT (2) GTAGTTTTCT (2) TCACTACCTC TCCAGCCCTT (2) TTTAAACTCT (2)
| 50.5 | 0.0505 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | ATGGTGGTAG (2) GCTCACAAGA (2) GCTCCTGTAT (2) GTCATAGCTG (2)
| 24.6 | 0.0246 |
| P1 cortex | AAGGCTCCTG (2) CAGTTATAAA (5) TCACTACCTC TTTAAACTCT (2)
| 31.8 | 0.0318 |
| Hypothalamus | CAGTTATAAA (5) GTAGTTTTCT (2) TCACTACCTC
| 47.1 | 0.0471 |
| E12.5 retina | CAGGAAAGAG CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2)
| 15.1 | 0.0151 |
| E14.5 retina | CTCAAGGCCC (3) GCTCACAAGA (2) TCACTACCTC TGTTCCCAAG (2) TTTAAACTCT (2)
| 9 | 0.009 |
| E16.5 retina | CAGTTATAAA (5) GCTCACAAGA (2) GCTCCTGTAT (2) TCCAGCCCTT (2) TGTTCCCAAG (2) TTTAAACTCT (2)
| 12.6 | 0.0126 |
| E18.5 retina | AGTGGATTCC CAGGAAAGAG CAGTTATAAA (5) TGTTCCCAAG (2) TTTAAACTCT (2)
| 23.6 | 0.0236 |
| P0.5 retina | CAGGAAAGAG CAGTTATAAA (5) CTCAAGGCCC (3) GTCATAGCTG (2) TCACTACCTC TTTAAACTCT (2)
| 19.6 | 0.0196 |
| P2.5 retina | CAGTTATAAA (5) GTCATAGCTG (2) TCACTACCTC TGTTCCCAAG (2) TTTAAACTCT (2)
| 19.5 | 0.0195 |
| P4.5 retina | CAGTTATAAA (5) GCTCCTGTAT (2) GTCATAGCTG (2) TGTTCCCAAG (2) TTTAAACTCT (2)
| 21.8 | 0.0218 |
| P6.5 retina | AAGGCTCCTG (2) CAGTTATAAA (5) CTCAAGGCCC (3) GGCTCCCCAA GTCATAGCTG (2) TCACTACCTC TCCAGCCCTT (2) TGTTCCCAAG (2) TTTAAACTCT (2)
| 43.4 | 0.0434 |
| P10.5 crx- retina | AAGGCTCCTG (2) CAGTTATAAA (5) CTCAAGGCCC (3) GCTCACAAGA (2) TTTAAACTCT (2)
| 18.7 | 0.0187 |
| P10.5 crx+ retina | CAGGAAAGAG CAGTTATAAA (5) GCTCACAAGA (2) GCTCCTGTAT (2) TCCAGCCCTT (2) TTTAAACTCT (2)
| 22.9 | 0.0229 |
| Adult retinal | AAGGCTCCTG (2) CAGTTATAAA (5) GATTTGAGGA (2) GCTCACAAGA (2) GGCTCCCCAA GTCATAGCTG (2) TGTTCCCAAG (2) TTTAAACTCT (2)
| 28 | 0.028 |
| ONL | AAGGCTCCTG (2) ATGGTGGTAG (2) CAGTTATAAA (5) GATTTGAGGA (2) GTAGTTTTCT (2) GTCATAGCTG (2) TCCAGCCCTT (2)
| 34.4 | 0.0344 |