| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGGTGGCGG (2) CAGGGTAAAA (3) GTGTGAAAAA TACTGGAGTA
| 17.9 | 0.0179 |
| Cb medulloblastoma | AGGGTGGCGG (2) CAGGGTAAAA (3) TACTGGAGTA
| 13.8 | 0.0138 |
| P8 GC+1d culture | AGGGTGGCGG (2) CCGCCTGCCA (2) CGCGCTTCCT GTGTGAAAAA TACTGGAGTA
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | AGGGTGGCGG (2) CAGGGTAAAA (3) CGCGCTTCCT TACTGGAGTA
| 9.5 | 0.0095 |
| 3T3 fibroblasts | AGGGTGGCGG (2) CGCGCTTCCT TACTGGAGTA
| 21 | 0.021 |
| P1 cortex | CGCGCTTCCT
| 4.5 | 0.0045 |
| Hypothalamus | AGGGTGGCGG (2) CGCGCTTCCT GTGTGAAAAA TACTGGAGTA
| 7.2 | 0.0072 |
| E12.5 retina | CGCGCTTCCT GTGTGAAAAA TACTGGAGTA
| 15.1 | 0.0151 |
| E14.5 retina | AGGGTGGCGG (2) GCAGGAGTCC GTGTGAAAAA TACTGGAGTA
| 25.4 | 0.0254 |
| E16.5 retina | AGGGTGGCGG (2) TACTGGAGTA
| 14.5 | 0.0145 |
| E18.5 retina | AGGGTGGCGG (2) CAGGGTAAAA (3) GTGTGAAAAA TACTGGAGTA
| 18.2 | 0.0182 |
| P0.5 retina | AGGGTGGCGG (2) CGCGCTTCCT TACTGGAGTA
| 11.8 | 0.0118 |
| P2.5 retina | AGGGTGGCGG (2) CCGCCTGCCA (2) CGCGCTTCCT TACTGGAGTA
| 7.2 | 0.0072 |
| P4.5 retina | AGGGTGGCGG (2) CAGGGTAAAA (3) CGCGCTTCCT
| 6 | 0.006 |
| P6.5 retina | CAGGGTAAAA (3) GCAGGAGTCC
| 3.4 | 0.0034 |
| P10.5 crx- retina | AGGGTGGCGG (2) TACTGGAGTA
| 9.3 | 0.0093 |
| P10.5 crx+ retina | AGGGTGGCGG (2) CAGGGTAAAA (3) CGCGCTTCCT
| 7.6 | 0.0076 |
| Adult retinal | CCGCCTGCCA (2) CGCGCTTCCT GCAGGAGTCC TACTGGAGTA
| 7.6 | 0.0076 |
| ONL | TACTGGAGTA
| 3.8 | 0.0038 |