Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274232	Smarcal1	Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	1	1 40.0 cM	54380
Gene Ontology	DNA dependent ATPase activity
Human Homolog	SMARCAL1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGCAAAAC (2) GGGCTCATTG 16.3 0.0163 Cb medulloblastoma CAGGCAAAAC (2) GGGCTCATTG 11.5 0.0115 P8 GC+1d culture CAGGCAAAAC (2) GGGCTCATTG 10.3 0.0103 P8 GC+SHH+1d culture CAGGCAAAAC (2) CTGCTGCAGC (2) CTGGTCTCCA GGGCTCATTG 23.4 0.0234 3T3 fibroblasts CAGGCAAAAC (2) GGGCTCATTG 14 0.014 E15 cortex CAGGCAAAAC (2) GAATTCCTGG (2) GGGCTCATTG 14.7 0.0147 P1 cortex CAGGCAAAAC (2) 9.1 0.0091 Hypothalamus CAGGCAAAAC (2) GAATTCCTGG (2) GGGCTCATTG GGGCTCCTTG (2) 10.8 0.0108 E12.5 retina CAGGCAAAAC (2) GGGCTCATTG 26.3 0.0263 E14.5 retina CAGGCAAAAC (2) CTGCTGCAGC (2) GGGCTCATTG GGGCTCCTTG (2) 21.9 0.0219 E16.5 retina CAGGCAAAAC (2) CTGGTCTCCA GAATTCCTGG (2) GGGCTCATTG 27.2 0.0272 E18.5 retina CAGGCAAAAC (2) GGGCTCATTG 32.7 0.0327 P0.5 retina CAGGCAAAAC (2) CTGGTCTCCA GGGCTCATTG 21.5 0.0215 P2.5 retina CAGGCAAAAC (2) CTGCTGCAGC (2) GGGCTCATTG GGGCTCCTTG (2) 35.2 0.0352 P4.5 retina CAGGCAAAAC (2) CTGCTGCAGC (2) GGGCTCATTG 23.8 0.0238 P6.5 retina CAGGCAAAAC (2) GGGCTCATTG 26.7 0.0267 P10.5 crx- retina CAGGCAAAAC (2) GGGCTCATTG 18.5 0.0185 P10.5 crx+ retina CAGGCAAAAC (2) GGGCTCATTG 27 0.027 Adult retinal CAGGCAAAAC (2) GGGCTCATTG GGGCTCCTTG (2) TCAAAAATGT 24.2 0.0242 ONL CAGGCAAAAC (2) GGGCTCATTG 38.3 0.0383