Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274425	Tia1	cytotoxic granule-associated RNA binding protein 1	6	6 D2	21841
Gene Ontology	apoptosis | cytoplasm | nucleus | RNA binding
Human Homolog	TIA1[TIA1 cytotoxic granule-associated RNA binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 232 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAAATGATCT (2) GAAGCCAGAA GAGCCAGTAT GCTGCTGCGG (2) TAATATAGAT TACCAGGAAC TCTCAAAAAA (3) TGGTGGAATG TTGATTTGCT 112.5 0.1125 Cb medulloblastoma AAGAAGAAAA (2) ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) CCCTTCTTCT (3) GAAGCCAGAA GAGCCAGTAT GCCACGTATA GCTTTGGTCT GCTTTTGGTC TCTCAAAAAA (3) TGGTGGAATG 150.1 0.1501 P8 GC+1d culture AAGAAGAAAA (2) AATTTTAAGA ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAAGCCAGAA GAGCCAGTAT GCCACGTATA GCTTTGGTCT GCTTTTGGTC TAATATAGAT TCTCAAAAAA (3) TGAATATCAC TGGTGGAATG 55.6 0.0556 P8 GC+SHH+1d culture ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTGCTGCGG (2) GCTTTGGTCT GCTTTTGGTC TAATATAGAT TACCAGGAAC TCTCAAAAAA (3) TGTTTGTTGG (2) TTGATTTGCT 69 0.069 3T3 fibroblasts ATTAAAAAAA (2) GAGCCAGTAT GCTGCTGCGG (2) TGGTGGAATG 24.5 0.0245 E15 cortex CCCTTCTTCT (3) GAGCCAGTAT TGGTGGAATG 183 0.183 P1 cortex ATCAAAAAAA (2) CCCTTCTTCT (3) GCCACGTATA GCTTTGGTCT TGGAGGGACG TGGTGGAATG 36.2 0.0362 Hypothalamus ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CAAAATGCTG CCCTTCTTCT (3) GAAGCCAGAA GAGCCAGTAT TCTCAAAAAA (3) TGGTGGAATG TTGATTTGCT 72.2 0.0722 E12.5 retina ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TGGTGGAATG 101.6 0.1016 E14.5 retina AATTTTAGGA ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAAAAAGAGA (2) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTGCTGCGG (2) TAATATAGAT TACCAGGAAC TCTCAAAAAA (3) TGGAGGGACG 119.9 0.1199 E16.5 retina AAAAAGTTTT AAGAAGAAAA (2) ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAAATGATCT (2) GAGCCAGTAT GCCACGTATA TAATATAGAT TACCAGGAAC TCTCAAAAAA (3) TGGAGGGACG 79.4 0.0794 E18.5 retina AAAAAGTTTT ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTGCTGCGG (2) GCTTTGGTCT GTATGATGCA (2) TAATATAGAT TCTCAAAAAA (3) TGAATATCAC TGGTGGAATG TTGATTTGCT 116.5 0.1165 P0.5 retina ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT GCTTTTGGTC TGGTGGAATG 55.1 0.0551 P2.5 retina ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CAAAATGCTG CCCTTCTTCT (3) GAAATGATCT (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TCTCAAAAAA (3) 102.3 0.1023 P4.5 retina AATTTTAAGA ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CCCTTCTTCT (3) CTTGCGTCCT GAAATGATCT (2) GAGCCAGTAT GCCACGTATA GCTGCTGCGG (2) GTATGATGCA (2) TAATATAGAT TCTCAAAAAA (3) TGGTGGAATG 109.2 0.1092 P6.5 retina ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTGCTGCGG (2) GCTTTGGTCT TAATATAGAT TCTCAAAAAA (3) TGGAGGGACG 69.9 0.0699 P10.5 crx- retina AAGAAGAAAA (2) AATTTTAAGA AATTTTAGGA ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) ATTAAAAAAA (2) CTTGCGTCCT GAGCCAGTAT GCCACGTATA GCTTTGGTCT 54.1 0.0541 P10.5 crx+ retina AAAAAGTTTT ATAAAAAAAA (2) ATCAAAAAAA (2) ATGAAAAAAA (2) CCCTTCTTCT (3) GAAGCCAGAA GAGCCAGTAT GCCACGTATA GCTGCTGCGG (2) GCTTTGGTCT GCTTTTGGTC TCTCAAAAAA (3) TGGTGGAATG TGTTTGTTGG (2) 95.8 0.0958 Adult retinal ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT GTATGATGCA (2) TACCAGGAAC TCTCAAAAAA (3) TGTTTGTTGG (2) 35.5 0.0355 ONL AAAAAGTTTT AAGAAGAAAA (2) AATTTTAGGA ATAAAAAAAA (2) CTTGCGTCCT GAAAAAGAGA (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TACCAGGAAC TCTCAAAAAA (3) TGAATATCAC 40 0.04