Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274770	Xist	inactive X specific transcripts	X	X 42.0 cM	213742
Gene Ontology	chromosome | dosage compensation, by inactivation of X chromosome
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAAATGAA (2) GAAAAAGGAA (4) GAAAACACCT (3) GGGGCTCACA (4) TCACAATGAG TGGTTGTTGG (2) 24.5 0.0245 Cb medulloblastoma CACAACAAAA (3) 11.6 0.0116 P8 GC+1d culture AGGAAATGAA (2) CACAACAAAA (3) GGGGCTCACA (4) TGGTTGTTGG (2) TTTCAGCACT (4) 9.1 0.0091 P8 GC+SHH+1d culture AGGAAATGAA (2) TGGTTGTTGG (2) 2.4 0.0024 3T3 fibroblasts CTATGTGTTG GAAAACACCT (3) GGTACTGGGA TGTGAGAGGA 17.5 0.0175 E15 cortex CCCAGCCTGA GGGGCTCACA (4) TGGTTGTTGG (2) 69.2 0.0692 P1 cortex AGGAAATGAA (2) CTATGTGTTG GAAAAAGGAA (4) GGGGCTCACA (4) TGGTTGTTGG (2) 54.5 0.0545 Hypothalamus AGGAAATGAA (2) CACAACAAAA (3) GGGGCTCACA (4) TGGTTGTTGG (2) 65.1 0.0651 E12.5 retina GAAAACACCT (3) GGGGCTCACA (4) GGTACTGGGA TCACAATGAG TGGTTGTTGG (2) TGTGAGAGGA TTTCAGCACT (4) 58.3 0.0583 E14.5 retina AGGAAATGAA (2) GAAAACACCT (3) GGGGCTCACA (4) GGTACTGGGA TCACAATGAG TGGTTGTTGG (2) 127.5 0.1275 E16.5 retina AGGAAATGAA (2) GGGGCTCACA (4) TGGTTGTTGG (2) TTTCAGCACT (4) 56.1 0.0561 E18.5 retina GGGGCTCACA (4) TCACAATGAG TGGTTGTTGG (2) TGTGAGAGGA 87.4 0.0874 P0.5 retina AGGAAATGAA (2) CTAATGCTCA CTATGTGTTG GGGGCTCACA (4) TCACAATGAG TGTGAGAGGA 66.8 0.0668 P2.5 retina AGGAAATGAA (2) CTATGTGTTG GAAAACACCT (3) GGGGCTCACA (4) TCACAATGAG TGGTTGTTGG (2) TGTGAGAGGA 146.1 0.1461 P4.5 retina AGGAAATGAA (2) CTATGTGTTG GAAAACACCT (3) GGGGCTCACA (4) GGTACTGGGA TCACAATGAG TGGTTGTTGG (2) 93.1 0.0931 P6.5 retina AAATAAGAAA CACAACAAAA (3) CTAATGCTCA CTATGTGTTG GAAAACACCT (3) GGGGCTCACA (4) TCACAATGAG TGGTTGTTGG (2) 126.8 0.1268 P10.5 crx- retina CCCAGCCTGA CTAATGCTCA GGGGCTCACA (4) TCACAATGAG TGGTTGTTGG (2) 46.5 0.0465 P10.5 crx+ retina CTAATGCTCA CTATGTGTTG GAAAACACCT (3) GGGGCTCACA (4) TCACAATGAG TGGTTGTTGG (2) 38.3 0.0383 Adult retinal AAATAAGAAA AGGAAATGAA (2) CACAACAAAA (3) GGGGCTCACA (4) TGGTTGTTGG (2) 46.4 0.0464 ONL AAATAAGAAA AGGAAATGAA (2) GGGGCTCACA (4) GGTACTGGGA TGGTTGTTGG (2) 59.3 0.0593