| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTCCTGAGGA GTGGGTGTTG TAGACACCTG (4)
| 9.7 | 0.0097 |
| Cb medulloblastoma | ATCAGTGTCT (2) GTCCTGAGGA GTGGGTGTTG
| 9.2 | 0.0092 |
| P8 GC+1d culture | ATCAGTGTCT (2) CTGGGATCTA (4) GAATAGACCC GTGGGTGTTG TAGACACCTG (4)
| 6.7 | 0.0067 |
| P8 GC+SHH+1d culture | CTGGGATCTA (4) GTCCTGAGGA GTGGGTGTTG TAGACACCTG (4)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | GTGGGTGTTG
| 17.5 | 0.0175 |
| E15 cortex | GAATAGACCC GTGGGTGTTG
| 14.8 | 0.0148 |
| P1 cortex | GTGGGTGTTG
| 4.5 | 0.0045 |
| Hypothalamus | GTCCTGAGGA
| 1.8 | 0.0018 |
| E12.5 retina | GAATAGACCC GTCCTGAGGA
| 7.5 | 0.0075 |
| E14.5 retina | ATCAGTGTCT (2) CTGGGATCTA (4) GTCCTGAGGA
| 12.7 | 0.0127 |
| E16.5 retina | CTGGGATCTA (4) GTGGGTGTTG
| 10.8 | 0.0108 |
| E18.5 retina | CTGGGATCTA (4) GAATAGACCC
| 3.6 | 0.0036 |
| P0.5 retina | CTGGGATCTA (4) GTCCTGAGGA GTGGGTGTTG
| 13.8 | 0.0138 |
| P2.5 retina | GAATAGACCC GTGGGTGTTG
| 5.3 | 0.0053 |
| P4.5 retina | GTGGGTGTTG
| 2 | 0.002 |
| P6.5 retina | GTCCTGAGGA GTGGGTGTTG TAGACACCTG (4)
| 10 | 0.01 |
| P10.5 crx- retina | GTCCTGAGGA GTGGGTGTTG TAGACACCTG (4)
| 16.7 | 0.0167 |
| P10.5 crx+ retina | ATCAGTGTCT (2) GTCCTGAGGA GTGGGTGTTG TAGACACCTG (4)
| 13.4 | 0.0134 |
| Adult retinal | ATCAGTGTCT (2) GAATAGACCC GTCCTGAGGA GTGGGTGTTG
| 14.9 | 0.0149 |
| ONL | ATCAGTGTCT (2) GAATAGACCC GTCCTGAGGA
| 5.7 | 0.0057 |