Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275127	Def8	differentially expressed in FDCP 8	8	8 E1 (8 67.0 cM)	23854
Gene Ontology	cellular_component unknown | intracellular signaling cascade | molecular_function unknown
Human Homolog	LOC342646[similar to differentially expressed in FDCP 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAAGCCA (2) AGTTAAGCAT TGAGGAGGAG (2) TTTCCAACTA 9.8 0.0098 Cb medulloblastoma AATAAAGCCA (2) AGTTAAGCAT TCTGTCCTGA (2) TTTTAGTGGA (3) 87.8 0.0878 P8 GC+1d culture AATAAAGCCA (2) AGTTAAGCAT CCCTGGCCTT (2) GGCCGCCTCA (2) TGAGGAGGAG (2) TTTCCAACTA TTTTAGTGGA (3) 15.8 0.0158 P8 GC+SHH+1d culture AATAAAGCCA (2) AGTTAAGCAT GGCCGCCTCA (2) TCTGTCCTGA (2) TGAGGAGGAG (2) TTTCCAACTA 15.2 0.0152 3T3 fibroblasts CCCTGGCCTT (2) 7 0.007 P1 cortex AATAAAGCCA (2) AGTTAAGCAT TGAGGAGGAG (2) TGATACAATG (2) 22.6 0.0226 Hypothalamus AATAAAGCCA (2) AGTTAAGCAT GGCCGCCTCA (2) TCTGTCCTGA (2) TGATACAATG (2) 97.7 0.0977 E12.5 retina AATAAAGCCA (2) AGTTAAGCAT CACACACCCC TGAGGAGGAG (2) 18.9 0.0189 E14.5 retina AGTTAAGCAT GGCCGCCTCA (2) 9.1 0.0091 E16.5 retina AATAAAGCCA (2) AGTTAAGCAT CACACACCCC GGCCGCCTCA (2) TCTGTCCTGA (2) TGAGGAGGAG (2) 12.6 0.0126 E18.5 retina AATAAAGCCA (2) CACACACCCC 16.4 0.0164 P0.5 retina AATAAAGCCA (2) AGTTAAGCAT GGCCGCCTCA (2) TCTGTCCTGA (2) TGAGGAGGAG (2) TGATACAATG (2) 17.7 0.0177 P2.5 retina AATAAAGCCA (2) AGTTAAGCAT GGCCGCCTCA (2) TCTGTCCTGA (2) 26.4 0.0264 P4.5 retina AATAAAGCCA (2) AGTTAAGCAT TCTGTCCTGA (2) TGAGGAGGAG (2) 53.6 0.0536 P6.5 retina AATAAAGCCA (2) AGTTAAGCAT TCTGTCCTGA (2) TGAGGAGGAG (2) 63.3 0.0633 P10.5 crx- retina AATAAAGCCA (2) AGTTAAGCAT TGAGGAGGAG (2) TTTCCAACTA 107.8 0.1078 P10.5 crx+ retina AATAAAGCCA (2) TTTCCAACTA 63.5 0.0635 Adult retinal AATAAAGCCA (2) AGTTAAGCAT GGCCGCCTCA (2) TCTGTCCTGA (2) TGAGGAGGAG (2) 74.3 0.0743 ONL AATAAAGCCA (2) AGTTAAGCAT CACACACCCC TTTTAGTGGA (3) 47.8 0.0478