| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGCAGAAG (2) ATTGTACAGT ATTGTCATTG (2) TCAGAGCAGC
| 9.8 | 0.0098 |
| Cb medulloblastoma | ATTGTACAGT TCAGAGCAGC
| 6.9 | 0.0069 |
| P8 GC+1d culture | ATTGTACAGT ATTGTCATTG (2) CCTTGCTAGA (2) TCAGAGCAGC
| 25.2 | 0.0252 |
| P8 GC+SHH+1d culture | ATTGTACAGT ATTGTCATTG (2) CCTTGCTAGA (2) TCAGAGCAGC
| 11.8 | 0.0118 |
| 3T3 fibroblasts | ATTGTACAGT GCACTGGGGA GTCATAGCTG (2) TCAGAGCAGC
| 28 | 0.028 |
| E15 cortex | ATTGTCATTG (2) GTCATAGCTG (2) TCAGAGCAGC
| 19.7 | 0.0197 |
| P1 cortex | ATTGTACAGT ATTGTCATTG (2) TCAGAGCAGC
| 13.5 | 0.0135 |
| Hypothalamus | GCACTGGGGA TCAGAGCAGC
| 5.4 | 0.0054 |
| E12.5 retina | ATTGTACAGT ATTGTCATTG (2)
| 3.8 | 0.0038 |
| E14.5 retina | ATTGTACAGT
| 1.8 | 0.0018 |
| E16.5 retina | ATTGTACAGT TCAGAGCAGC
| 7.2 | 0.0072 |
| E18.5 retina | GCACTGGGGA
| 1.8 | 0.0018 |
| P0.5 retina | ATTGTACAGT GTCATAGCTG (2) TCAGAGCAGC
| 7.9 | 0.0079 |
| P2.5 retina | AATGCAGAAG (2) ATTGTACAGT GTCATAGCTG (2)
| 7.1 | 0.0071 |
| P4.5 retina | ATTGTCATTG (2) GTCATAGCTG (2) TCAGAGCAGC
| 6 | 0.006 |
| P6.5 retina | AATGCAGAAG (2) ATTGTACAGT GTCATAGCTG (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | ATTGTACAGT TCAGAGCAGC
| 3.8 | 0.0038 |
| P10.5 crx+ retina | ATTGTACAGT TCAGAGCAGC
| 9.6 | 0.0096 |
| Adult retinal | GTCATAGCTG (2) TCAGAGCAGC
| 3.8 | 0.0038 |
| ONL | AATGCAGAAG (2) ATTGTACAGT GTCATAGCTG (2) TCAGAGCAGC
| 13.3 | 0.0133 |