| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTGGGTCACA (7) TAAGACAATA TGGAAATCAA
| 6.5 | 0.0065 |
| Cb medulloblastoma | GTGGGTCACA (7) GTTTGAATTT TGGAAATCAA
| 11.5 | 0.0115 |
| P8 GC+1d culture | GTGGGTCACA (7) GTTTGAATTT TAAGAAAATG (3) TGGAAATCAA
| 12.6 | 0.0126 |
| P8 GC+SHH+1d culture | GTGGGTCACA (7) GTTTGAATTT TGGAAATCAA
| 5.8 | 0.0058 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | GTCATAGCTG (2) GTGGGTCACA (7)
| 14.8 | 0.0148 |
| Hypothalamus | AGTTTCATAT GTGGGTCACA (7) TGGAAATCAA
| 7.2 | 0.0072 |
| E12.5 retina | AGTTTCATAT CCTTTTATCC (2) GTGGGTCACA (7)
| 7.6 | 0.0076 |
| E14.5 retina | GTGGGTCACA (7) TGGAAATCAA
| 3.6 | 0.0036 |
| E16.5 retina | CCTTTTATCC (2) GTGGGTCACA (7) GTTTGAATTT TAAGAAAATG (3) TGGAAATCAA
| 14.4 | 0.0144 |
| E18.5 retina | GTGGGTCACA (7) TAAGACAATA
| 9.1 | 0.0091 |
| P0.5 retina | GTCATAGCTG (2) GTGGGTCACA (7) TGGAAATCAA
| 7.9 | 0.0079 |
| P2.5 retina | GTCATAGCTG (2) GTGGGTCACA (7) TGGAAATCAA
| 8.8 | 0.0088 |
| P4.5 retina | AGTTTCATAT GTCATAGCTG (2) TGGAAATCAA
| 6 | 0.006 |
| P6.5 retina | CCTTTTATCC (2) GTCATAGCTG (2) TAAGACAATA TGGAAATCAA
| 13.4 | 0.0134 |
| P10.5 crx- retina | TGGAAATCAA
| 9.3 | 0.0093 |
| P10.5 crx+ retina | TGGAAATCAA
| 19.2 | 0.0192 |
| Adult retinal | CCTTTTATCC (2) GTCATAGCTG (2) GTGGGTCACA (7) TGGAAATCAA
| 11.3 | 0.0113 |
| ONL | CCTTTTATCC (2) GTCATAGCTG (2) GTGGGTCACA (7) TGGAAATCAA
| 28.7 | 0.0287 |