Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276137	Atp5a1	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1	18	18 50.0 cM	11946
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | extracellular space | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex
Human Homolog	ATP5A1[ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1, cardiac muscle] | ATP5A1[ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1, cardiac muscle]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 231 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAATAAAGTT (2) AAGAGACACC AATAAAAAGT (4) AATAAAAGCT (2) AATAAAAGTT (2) AATTAAAGTT (2) ATCTCCCAGG CCTCTAACAC CTGGGATAGC GAAAGGCCAC (2) GATAGATAAT GCTATTGAAG GGCTGAGGAA (2) GTACCTGCCA TAAATGCTTA TGGGGAAAAG 285.4 0.2854 Cb medulloblastoma AAAAAAAAAA (2) AAGAGACACC AATAAAAGTC AATAAAAGTT (2) GAGATTTCTT GATAGATAAT GCTTTTAAAG GTACCTGCCA TAAATGCTTA TGATTTCTGT TGGGGAAAAG 924.8 0.9248 P8 GC+1d culture AAAAAAAAAA (2) AAATAAAGTT (2) AAGTCACCAT (2) AATAAAAGCT (2) AATAAAAGTT (2) AATTAAAGTT (2) CGGGATGCCC GAAAGGCCAC (2) GATAGATAAT GCTATTGAAG GTACCTGCCA TCCCTTCACT TTGAGTTCCA TTGAGTTTCA 266.8 0.2668 P8 GC+SHH+1d culture AAAAAAAAAA (2) AAATAAAGTT (2) AAGTCACCAT (2) AATAAAAGTT (2) AATTAAAGTT (2) GAAAGGCCAC (2) GAGATTTCTT GATAGATAAT GCTATTGAAG GTACCTGCCA TAAATGCTTA TGATTTCTGT 357.2 0.3572 3T3 fibroblasts AAAAAAAAAA (2) GATAGATAAT 31.5 0.0315 E15 cortex AAAAAAAAAA (2) AATAAAAGTT (2) GATAGATAAT GTACCTGCCA TGGGGAAAAG 247.3 0.2473 P1 cortex AAAAAAAAAA (2) AATAAAAGTT (2) AATTAAAGTT (2) ACCCAACATC ATCTCCCAGG CGGGATGCCC CTGGGATAGC GATAGATAAT GCCCCCCCGC GGAGAGGTAC GTACCTGCCA TCCCTTCACT 313.3 0.3133 Hypothalamus AAAAAAAAAA (2) AAATAAAGTT (2) AAGAGACACC AATAAAAGTC AATAAAAGTT (2) ATCTCCCAGG GAAAGGCCAC (2) GATAGATAAT GGAGAGTACT TGATTTCTGT 181 0.181 E12.5 retina AAAAAAAAAA (2) AAATAAAGTT (2) AAGTCGTGCT AATAAAAGTT (2) CTGGGATAGC GAAAGGCCAC (2) GAGATTTCTT GATAGATAAT GCTATTGAAG GGAGAGGTAC GGTTCCTTTT (2) TGGGGAAAAG TTGAGTTTCA 203 0.203 E14.5 retina AAAAAAAAAA (2) AAGTCACCAT (2) AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) GAAAGGCCAC (2) GACACACACA GATAGATAAT GCCCCCCCGC GGAGAGTACT GGCTGAGGAA (2) GTACCTGCCA TGATTTCTGT TTGAGTTTCA 160 0.16 E16.5 retina AAAAAAAAAA (2) AAATAAAGTT (2) AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) ACCCAACATC ATTGCCCTTG GAAAGGCCAC (2) GATAGATAAT GGAGAGTACT GGCTGAGGAA (2) GTACCTGCCA TGATTTCTGT TTGAGTTCCA 132.2 0.1322 E18.5 retina AAAAAAAAAA (2) AATAAAAGTT (2) AATTAAAGTT (2) CCTCTAACAC GATAGATAAT GCCCCCCCGC GGAGAGTACT GGTTCCTTTT (2) GTACCTGCCA TGATTTCTGT 454.6 0.4546 P0.5 retina AAAAAAAAAA (2) AATAAAAAGT (4) AATAAAAGTT (2) ATCTCCCAGG GAAAGGCCAC (2) GAGATTTCTT GATAGATAAT GGAGAGGTAC GGAGAGTACT GTACCTGCCA TGATTTCTGT 157.2 0.1572 P2.5 retina AAAAAAAAAA (2) AAGAGACACC AAGTCACCAT (2) AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) GAAAGGCCAC (2) GATAGATAAT GCTATTGAAG GGTTCCTTTT (2) GTACCTGCCA 387.3 0.3873 P4.5 retina AAAAAAAAAA (2) AAATAAAGTT (2) AAGAGACACC AATAAAAGTT (2) AATTAAAGTT (2) ATTGCCCTTG CCTCTAACAC GAAAGGCCAC (2) GATAGATAAT GCTATTGAAG GTACCTGCCA TCCCTTCACT TGGGGAAAAG TTGAGTTCCA 362.8 0.3628 P6.5 retina AAAAAAAAAA (2) AAATAAAGTT (2) AAGAGACACC AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) ATCTCCCAGG GAAAGGCCAC (2) GATAGATAAT GGAGAGGTAC GTACCTGCCA TAAATGCTTA TCCCTTCACT 338.4 0.3384 P10.5 crx- retina AAAAAAAAAA (2) AAGAGACACC AAGTCACCAT (2) AATAAAAAGT (4) AATAAAAGTC AATAAAAGTT (2) AATTAAAGTT (2) ATCTCCCAGG GAAAGGCCAC (2) GATAGATAAT GGTTCCTTTT (2) 124.7 0.1247 P10.5 crx+ retina AAAAAAAAAA (2) AAATAAAGTT (2) AAGTCACCAT (2) AAGTCGTGCT AATAAAAAGT (4) AATAAAAGTT (2) GAAAGGCCAC (2) GATAGATAAT GGCTGAGGAA (2) GTACCTGCCA TCCCTTCACT TGATTTCTGT TGGGGAAAAG 172.9 0.1729 Adult retinal AAAAAAAAAA (2) AATAAAAGTT (2) ATCTCCCAGG GAAAGGCCAC (2) GATAGATAAT GCTTTTAAAG GTACCTGCCA TGATTTCTGT 87.3 0.0873 ONL AAAAAAAAAA (2) AAATAAAGTT (2) AAGCTGGATG AATAAAAGCT (2) AATAAAAGTT (2) AATTAAAGTT (2) ATTGCCCTTG GAAAGGCCAC (2) GACACACACA GATAGATAAT GCTATTGAAG GCTTTTAAAG TAAATGCTTA TGATTTCTGT TTGAGTTCCA TTGAGTTTCA 181.7 0.1817