| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATCCAAAGGA CCCCAGCCCC (2) TTAAATAAAA (4) TTCAAAAAAA (2) TTCTGATTAA
| 21.2 | 0.0212 |
| Cb medulloblastoma | TATGATCAAT TTCAAAAAAA (2) TTCTGATTAA TTGTAAAAAA
| 50.8 | 0.0508 |
| P8 GC+1d culture | TATGATCAAT TTAAATAAAA (4) TTCAAAAAAA (2) TTCTGATTAA TTGTAAAAAA
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | TTAAATAAAA (4) TTCAAAAAAA (2) TTGTAAAAAA
| 31.7 | 0.0317 |
| 3T3 fibroblasts | CCCCAGCCCC (2)
| 3.5 | 0.0035 |
| E15 cortex | TTCAAAAAAA (2)
| 29.7 | 0.0297 |
| P1 cortex | TTAAATAAAA (4) TTCAAAAAAA (2)
| 13.6 | 0.0136 |
| Hypothalamus | CCCCAGCCCC (2) TATGATCAAT TTCAAAAAAA (2) TTCTGATTAA TTGTAAAAAA
| 18 | 0.018 |
| E12.5 retina | TTCAAAAAAA (2)
| 9.4 | 0.0094 |
| E14.5 retina | TTCAAAAAAA (2)
| 20 | 0.02 |
| E16.5 retina | CCCCAGCCCC (2) TTCAAAAAAA (2)
| 10.9 | 0.0109 |
| E18.5 retina | TTAAATAAAA (4) TTCAAAAAAA (2) TTGTAAAAAA
| 41.8 | 0.0418 |
| P0.5 retina | ATCCAAAGGA CCCTCCCTCA (3) TTAAATAAAA (4) TTCAAAAAAA (2)
| 15.8 | 0.0158 |
| P2.5 retina | TTAAATAAAA (4) TTCAAAAAAA (2)
| 10.5 | 0.0105 |
| P4.5 retina | ATCCAAAGGA CCCTCCCTCA (3) TTCAAAAAAA (2)
| 35.7 | 0.0357 |
| P6.5 retina | TTAAATAAAA (4) TTCAAAAAAA (2) TTCTGATTAA
| 11.7 | 0.0117 |
| P10.5 crx- retina | CCCCAGCCCC (2) TTAAATAAAA (4) TTCAAAAAAA (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | CCCTCCCTCA (3) TTCAAAAAAA (2)
| 13.4 | 0.0134 |
| Adult retinal | CCCCAGCCCC (2) CCCTCCCTCA (3) TTCAAAAAAA (2)
| 13.1 | 0.0131 |
| ONL | CCCCAGCCCC (2) CCCTCCCTCA (3) TTAAATAAAA (4) TTCAAAAAAA (2)
| 11.4 | 0.0114 |