| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCCCTGCGC (3) TGGGTTTAGA
| 37.5 | 0.0375 |
| Cb medulloblastoma | GCCCCTGCGC (3) TGGGTTTAGA
| 23.1 | 0.0231 |
| P8 GC+1d culture | GCCCCTGCGC (3) TGGGTTTAGA
| 55.9 | 0.0559 |
| P8 GC+SHH+1d culture | GCCCCTGCGC (3) TGGGTTTAGA
| 42.2 | 0.0422 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | GTCATAGCTG (2) TGGGTTTAGA
| 9.8 | 0.0098 |
| P1 cortex | GCCCCTGCGC (3)
| 4.5 | 0.0045 |
| Hypothalamus | GCCCTGGGTT (2) TGGGTTTAGA
| 41.6 | 0.0416 |
| E12.5 retina | GCCCCTGCGC (3) TGGGTTTAGA
| 43.2 | 0.0432 |
| E14.5 retina | GAGAAGATGA (2) GCCCCTGCGC (3) GCCCTGGGTT (2) TGGGTTTAGA
| 61.9 | 0.0619 |
| E16.5 retina | GAGAAGATGA (2) GCCCCTGCGC (3) TGGGTTTAGA
| 57.9 | 0.0579 |
| E18.5 retina | GAGAAGATGA (2) GCCCCTGCGC (3) GCCCTGGGTT (2) TGGGTTTAGA
| 96.4 | 0.0964 |
| P0.5 retina | GCCCCTGCGC (3) GTCATAGCTG (2) TGGGTTTAGA
| 35.3 | 0.0353 |
| P2.5 retina | GCCCCTGCGC (3) GTCATAGCTG (2) TGGGTTTAGA
| 67 | 0.067 |
| P4.5 retina | GCCCCTGCGC (3) GTCATAGCTG (2) TGGGTTTAGA
| 53.5 | 0.0535 |
| P6.5 retina | GTCATAGCTG (2) TGGGTTTAGA
| 40 | 0.04 |
| P10.5 crx- retina | GCCCCTGCGC (3) TGGGTTTAGA
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GAGAAGATGA (2) GCCCCTGCGC (3) TGGGTTTAGA
| 30.7 | 0.0307 |
| Adult retinal | GCCCCTGCGC (3) GTCATAGCTG (2) TGGGTTTAGA
| 37.1 | 0.0371 |
| ONL | GCCCCTGCGC (3) GCCCTGGGTT (2) GTCATAGCTG (2) TGGGTTTAGA
| 26.7 | 0.0267 |