Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279256	Ndrg3	N-myc downstream regulated gene 3	2		29812
Gene Ontology	catalytic activity | cell differentiation
Human Homolog	NDRG3[NDRG family member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACT CTGGCAGATG (2) CTTTCTTGTA TAATGTCCCT (3) TTAAAAAAAA (2) 21.2 0.0212 Cb medulloblastoma ATGGTGTGCT GTAGTTCACA TGTGTGCAAG (3) TGTGTGCGAG TTAAAAAAAA (2) 62.4 0.0624 P8 GC+1d culture AATTTTTTTT (2) TAATGTCCCT (3) TGTGTGCAAG (3) TGTGTGCGAG TTAAAAAAAA (2) 36.5 0.0365 P8 GC+SHH+1d culture AATTTTTTTT (2) GTAGTTCACA TAATGTCCCT (3) TGTGTGCAAG (3) TTAAAAAAAA (2) 41 0.041 3T3 fibroblasts CCAAGGCACA 3.5 0.0035 E15 cortex AATTTTTTTT (2) CCAAGGCACA TTAAAAAAAA (2) 14.7 0.0147 P1 cortex TAATGTCCCT (3) TTAAAAAAAA (2) 18.1 0.0181 Hypothalamus ATGGTGTGCT CTTTCTTGTA TAATGTCCCT (3) TGTGTGCAAG (3) TGTGTGCGAG TTAAAAAAAA (2) 30.7 0.0307 E12.5 retina CCAAGGCACA GTAGTTCACA TAATGTCCCT (3) TGTGTGCAAG (3) TTAAAAAAAA (2) 22.6 0.0226 E14.5 retina CACACACACT CTTTCCTGTA GTAGTTCACA TAATGTCCCT (3) TTAAAAAAAA (2) 25.4 0.0254 E16.5 retina CTGGCAGATG (2) CTTTCCTGTA GTAGTTCACA TTAAAAAAAA (2) 21.7 0.0217 E18.5 retina CTGGCAGATG (2) TTAAAAAAAA (2) 52.7 0.0527 P0.5 retina CACACACACT CCAAGGCACA GTAGTTCACA TGTGTGCAAG (3) TTAAAAAAAA (2) 27.6 0.0276 P2.5 retina CACACACACT CCAAGGCACA CTGGCAGATG (2) GTAGTTCACA TAATGTCCCT (3) TGTGTGCAAG (3) TTAAAAAAAA (2) 60 0.06 P4.5 retina GTAGTTCACA TAATGTCCCT (3) TTAAAAAAAA (2) 51.6 0.0516 P6.5 retina ATGGTGTGCT CCAAGGCACA GTAGTTCACA TGTGTGCAAG (3) TGTGTGCGAG TTAAAAAAAA (2) 26.8 0.0268 P10.5 crx- retina ATGGTGTGCT CTTTCTTGTA TAATGTCCCT (3) TGTGTGCGAG TTAAAAAAAA (2) 27.9 0.0279 P10.5 crx+ retina TAATGTCCCT (3) TGTGTGCAAG (3) TTAAAAAAAA (2) 13.5 0.0135 Adult retinal CACACACACT CTGGCAGATG (2) CTTTCCTGTA CTTTCTTGTA GTAGTTCACA TAATGTCCCT (3) TGTGTGCGAG TTAAAAAAAA (2) 29.9 0.0299 ONL ATGGTGTGCT CTGGCAGATG (2) GTAGTTCACA TAATGTCCCT (3) TGTGTGCAAG (3) TTAAAAAAAA (2) 24.8 0.0248