| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATAAATGA (2) CAACAGAACC (3) CAGCCACACA (3) GAATACGTAC GCGGCGGCGG (3) GCGGGGGGGG (2) GGGGGAAGCA (3) TAATATTACT
| 32.5 | 0.0325 |
| Cb medulloblastoma | AAATAAATGA (2) CAGCCACACA (3) GAATACGTAC GAGCAGTAAA GCGGCGGCGG (3) GCGGGGGGGG (2) GGGGGGGGGG
| 27.6 | 0.0276 |
| P8 GC+1d culture | AAATAAATGA (2) ATTTTTCCTT CAACAGAACC (3) CAGCCACACA (3) GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG TAATATTACT
| 21.7 | 0.0217 |
| P8 GC+SHH+1d culture | AAATAAATGA (2) ACCTGCTGGG (2) CAACAGAACC (3) GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG TAATATTACT
| 50.3 | 0.0503 |
| 3T3 fibroblasts | GCGGCGGCGG (3) GGGGGGGGGG GTCATAGCTG (2)
| 17.5 | 0.0175 |
| E15 cortex | GGGGGGGGGG GTCATAGCTG (2)
| 9.8 | 0.0098 |
| P1 cortex | AAATAAATGA (2)
| 4.5 | 0.0045 |
| Hypothalamus | ACCTGCTGGG (2) CAACAGAACC (3) CAGCCACACA (3) GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG
| 16.2 | 0.0162 |
| E12.5 retina | AAATAAATGA (2) CAACAGAACC (3) GAATACGTAC GCGGCGGCGG (3) GCGGGGGGGG (2) GGGGGAAGCA (3)
| 33.8 | 0.0338 |
| E14.5 retina | AAATAAATGA (2) CAACAGAACC (3) CAGCCACACA (3) GCGGCGGCGG (3) GGGGGAAGCA (3) TAATATTACT
| 21.8 | 0.0218 |
| E16.5 retina | AAATAAATGA (2) ACCTGCTGGG (2) ATTACGCCAA CAGCCACACA (3) GCGGCGGCGG (3) GGGGGAAGCA (3) TAATATTACT
| 25.3 | 0.0253 |
| E18.5 retina | AAATAAATGA (2) CAACAGAACC (3) GCGGCGGCGG (3) GGGGGAAGCA (3)
| 27.2 | 0.0272 |
| P0.5 retina | AAATAAATGA (2) ATTACGCCAA CAGCCACACA (3) GCGGCGGCGG (3) GGGGGAAGCA (3) GTCATAGCTG (2)
| 23.7 | 0.0237 |
| P2.5 retina | AAATAAATGA (2) CAACAGAACC (3) GAGCAGTAAA GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG GTCATAGCTG (2) TAATATTACT
| 44 | 0.044 |
| P4.5 retina | ATTTTTCCTT CAACAGAACC (3) GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG GTCATAGCTG (2) TAATATTACT
| 31.8 | 0.0318 |
| P6.5 retina | AAATAAATGA (2) CAACAGAACC (3) GAATACGTAC GCGGCGGCGG (3) GCGGGGGGGG (2) GGGGGAAGCA (3) GGGGGGGGGG GTCATAGCTG (2) TAATATTACT
| 29.9 | 0.0299 |
| P10.5 crx- retina | AAATAAATGA (2) CAACAGAACC (3) GCGGCGGCGG (3) GGGGGAAGCA (3) TAATATTACT
| 20.5 | 0.0205 |
| P10.5 crx+ retina | AAATAAATGA (2) ACCTGCTGGG (2) CAACAGAACC (3) CAGCCACACA (3) GCGGCGGCGG (3) GCGGGGGGGG (2) GGGGGAAGCA (3) GGGGGGGGGG TAATATTACT
| 44.1 | 0.0441 |
| Adult retinal | ACCTGCTGGG (2) ATTACGCCAA CAACAGAACC (3) GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG GTCATAGCTG (2)
| 35.3 | 0.0353 |
| ONL | AAATAAATGA (2) CAACAGAACC (3) CAGCCACACA (3) GAGCAGTAAA GCGGCGGCGG (3) GGGGGAAGCA (3) GGGGGGGGGG GTCATAGCTG (2) TAATATTACT
| 32.4 | 0.0324 |