Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28015	4930442L01Rik	RIKEN cDNA 4930442L01 gene	3		67583
Mm.28015	Pdzk1	PDZ domain containing 1	3		59020
Mm.28015	AW552393	expressed sequence AW552393	3		99922
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGATACCCC (4) CTTTCTCATT (6) GCCTCACATC (3) GTCCCCTCCC TGGTTGCTGG 76.6 0.0766 Cb medulloblastoma CTTTCTCATT (6) GCCTCACATC (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG TTCCTCCTTT (3) 131.7 0.1317 P8 GC+1d culture AGGATACCCC (4) CTTTCTCATT (6) GCCTCACATC (3) GGCTCAGCCA (2) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG 76.4 0.0764 P8 GC+SHH+1d culture AGGATACCCC (4) CAAATACACA GCCTCACATC (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG 103.1 0.1031 3T3 fibroblasts AGGATACCCC (4) GTCCCCTCCC TGCTGGGCTG (5) TGGTTGCTGG 234.8 0.2348 E15 cortex TGCTGGGCTG (5) TGGTTGCTGG 282 0.282 P1 cortex TATGTATTCT TGGTTGCTGG 90.9 0.0909 Hypothalamus ACAGAAAGTG (3) CAAATACACA GCCTCACATC (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG 373.1 0.3731 E12.5 retina AGGATACCCC (4) CAAATACACA GCCTCACATC (3) GGCTCAGCCA (2) TGCTGGGCTG (5) TGGTTGCTGG 176.5 0.1765 E14.5 retina AGGATACCCC (4) TATGTATTCT TGGTTGCTGG TTCCTCCTTT (3) 941.9 0.9419 E16.5 retina TGCTGGGCTG (5) TGGTTGCTGG TTCCTCCTTT (3) 771.5 0.7715 E18.5 retina AGGATACCCC (4) GCCTCACATC (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG 267.3 0.2673 P0.5 retina AGGATACCCC (4) GCCTCACATC (3) GGGGTAGACT (3) TGCTGGGCTG (5) TGGTTGCTGG TTCCTCCTTT (3) 208.1 0.2081 P2.5 retina GGCTCAGCCA (2) GGGGTAGACT (3) TGCTGGGCTG (5) TGGTTGCTGG 170.8 0.1708 P4.5 retina ACAGAAAGTG (3) AGGATACCCC (4) CAAATACACA GGGGTAGACT (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG 164.6 0.1646 P6.5 retina GCCTCACATC (3) GGGGTAGACT (3) TATGTATTCT TGGTTGCTGG 163.4 0.1634 P10.5 crx- retina ACAGAAAGTG (3) AGGATACCCC (4) GCCTCACATC (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG 293.6 0.2936 P10.5 crx+ retina AGGATACCCC (4) GGCTCAGCCA (2) TATGTATTCT TGGTTGCTGG TTCCTCCTTT (3) 111.4 0.1114 Adult retinal AGGATACCCC (4) GCCTCACATC (3) GGGGTAGACT (3) TATGTATTCT TGCTGGGCTG (5) TGGTTGCTGG TTCCTCCTTT (3) 231.6 0.2316 ONL CAAATACACA GCCTCACATC (3) GGGGTAGACT (3) TGCTGGGCTG (5) TGGTTGCTGG 415.6 0.4156