| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 47.3 | 0.0473 |
| Cb medulloblastoma | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 175.7 | 0.1757 |
| P8 GC+1d culture | CCAGAGATGG GAAAAAAAAA (2) GAAGAAAAAA (3)
| 45.6 | 0.0456 |
| P8 GC+SHH+1d culture | GAAAAAAAAA (2) GAAGAAAAAA (3) GAAGGAAAAA (2)
| 79.7 | 0.0797 |
| 3T3 fibroblasts | AGTGCAGAGG CCAGAGATGG
| 14 | 0.014 |
| E15 cortex | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 64.3 | 0.0643 |
| P1 cortex | CCAGAGATGG GAAAAAAAAA (2) GAAGGAAAAA (2)
| 54.5 | 0.0545 |
| Hypothalamus | GAAAAAAAAA (2)
| 67 | 0.067 |
| E12.5 retina | GAAAAAAAAA (2) GAAGAAAAAA (3) GAAGGAAAAA (2)
| 54.4 | 0.0544 |
| E14.5 retina | GAAAAAAAAA (2) GAAGAAAAAA (3) GAAGGAAAAA (2)
| 38.2 | 0.0382 |
| E16.5 retina | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 25.3 | 0.0253 |
| E18.5 retina | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 81.9 | 0.0819 |
| P0.5 retina | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 39.2 | 0.0392 |
| P2.5 retina | GAAAAAAAAA (2) GAAGAAAAAA (3) GAAGGAAAAA (2)
| 89.8 | 0.0898 |
| P4.5 retina | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 57.4 | 0.0574 |
| P6.5 retina | AGTGCAGAGG GAAAAAAAAA (2) GAAGAAAAAA (3)
| 45 | 0.045 |
| P10.5 crx- retina | GAAAAAAAAA (2)
| 16.7 | 0.0167 |
| P10.5 crx+ retina | GAAAAAAAAA (2) GAAGGAAAAA (2)
| 44.2 | 0.0442 |
| Adult retinal | GAAAAAAAAA (2)
| 16.7 | 0.0167 |
| ONL | CCAGAGATGG GAAAAAAAAA (2) GAAGAAAAAA (3) GAAGGAAAAA (2)
| 32.5 | 0.0325 |