Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280968	Cbx3	chromobox homolog 3 (Drosophila HP1 gamma)	6	6 B2.3 (6 26.0 cM)	12417
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | nucleus | regulation of transcription, DNA-dependent
Human Homolog	CBX3[chromobox homolog 3 (HP1 gamma homolog, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTGTCCTC CTTTTTCTTT GTATCAAATA GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 29.4 0.0294 Cb medulloblastoma AAGGTGGAAA CTTTTTCTTT GTGGATTTTC (2) 20.8 0.0208 P8 GC+1d culture AAGTGTCCTC CTTTTTCTTT GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 38.7 0.0387 P8 GC+SHH+1d culture AAGGTGGAAA CTTTTTCTTT GTATCAAATA GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 31.7 0.0317 3T3 fibroblasts CTTTTTCTTT GTCATAGCTG (2) 14 0.014 E15 cortex GTCATAGCTG (2) GTGGATTTTC (2) TACAACACTC (3) 14.7 0.0147 P1 cortex GTATCAAATA TACAACACTC (3) 45.4 0.0454 Hypothalamus AAGGTGGAAA CTTTTTCTTT GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 12.6 0.0126 E12.5 retina AAGGTGGAAA AAGTGTCCTC CTTTTTCTTT GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 32 0.032 E14.5 retina AAGTGTCCTC CTTTTTCTTT TACAACACTC (3) 14.5 0.0145 E16.5 retina CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 21.7 0.0217 E18.5 retina AAGTGTCCTC CTTTTTCTTT GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 23.6 0.0236 P0.5 retina AAGTGTCCTC CTTTTTCTTT GTCATAGCTG (2) TACAACACTC (3) TTGTATTTCC 27.5 0.0275 P2.5 retina AAGTGTCCTC CTTTTTCTTT GTCATAGCTG (2) GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 38.8 0.0388 P4.5 retina AAGGTGGAAA CTTTTTCTTT GTCATAGCTG (2) TACAACACTC (3) TTGTATTTCC 41.7 0.0417 P6.5 retina AAGTGTCCTC CTTTTTCTTT GTCATAGCTG (2) GTGGATTTTC (2) TACAACACTC (3) TTGTATTTCC 18.4 0.0184 P10.5 crx- retina AAGGTGGAAA CTTTTTCTTT GTGGATTTTC (2) TACAACACTC (3) 16.8 0.0168 P10.5 crx+ retina CTTTTTCTTT TACAACACTC (3) TTGTATTTCC 9.5 0.0095 Adult retinal CTTTTTCTTT GTCATAGCTG (2) TACAACACTC (3) 13 0.013 ONL CTTTTTCTTT GTCATAGCTG (2) 9.5 0.0095