Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.281019
D8Ertd563e
DNA segment, Chr 8, ERATO Doi 563, expressed
8
8 36.0 cM
52338
Mm.281019
1500041J02Rik
RIKEN cDNA 1500041J02 gene
1
67876
Human Homolog
FLJ13448[hypothetical protein FLJ13448]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAGGTTGG
ATTTAATAAA
CCATATGGCT
(
2
)
4.8
0.0048
Cb medulloblastoma
ACTTAATAAA
(
2
)
ATTTAATAAA
9.2
0.0092
P8 GC+1d culture
AAAAGGTTGG
ACTTAATAAA
(
2
)
ACTTCAGCCT
(
2
)
ATTTAATAAA
CCATATGGCT
(
2
)
10.2
0.0102
P8 GC+SHH+1d culture
ACTTAATAAA
(
2
)
CCATATGGCT
(
2
)
2.4
0.0024
3T3 fibroblasts
CCATATGGCT
(
2
)
3.5
0.0035
P1 cortex
ATTTAATAAA
4.5
0.0045
Hypothalamus
AAAAGGTTGG
ACTTAATAAA
(
2
)
ATTTAATAAA
CCATATGGCT
(
2
)
10.8
0.0108
E12.5 retina
AAAAGGTTGG
1.9
0.0019
E14.5 retina
ACTTAATAAA
(
2
)
ATTTAATAAA
5.4
0.0054
E16.5 retina
ATTTAATAAA
1.8
0.0018
E18.5 retina
AAAAGGTTGG
ACTTAATAAA
(
2
)
5.4
0.0054
P0.5 retina
ACTTCAGCCT
(
2
)
2
0.002
P2.5 retina
AAAAGGTTGG
ATTTAATAAA
CCATATGGCT
(
2
)
12.3
0.0123
P4.5 retina
ACTTAATAAA
(
2
)
ATTTAATAAA
7.9
0.0079
P6.5 retina
ATTTAATAAA
CCATATGGCT
(
2
)
3.4
0.0034
P10.5 crx- retina
AAAAGGTTGG
ACTTAATAAA
(
2
)
ATTTAATAAA
5.7
0.0057
P10.5 crx+ retina
ACTTAATAAA
(
2
)
ATTTAATAAA
CCATATGGCT
(
2
)
7.6
0.0076
Adult retinal
CCATATGGCT
(
2
)
3.7
0.0037
ONL
ATTTAATAAA
CCATATGGCT
(
2
)
9.6
0.0096
