Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282242	Scarb1	scavenger receptor class B, member 1	5	5 68.0 cM	20778
Gene Ontology	cell adhesion | integral to membrane | membrane | receptor activity
Human Homolog	SCARB1[scavenger receptor class B, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGAAGCAA GCAGACAGGG GCGCCCTCCC (3) TGCAAAAAAA (2) 13 0.013 Cb medulloblastoma GCAGACAGGG TGCAAAAAAA (2) 16.2 0.0162 P8 GC+1d culture ACTGGATTAC GCAGACAGGG GCGCCCTCCC (3) GGCAAAGCTA (2) TCCTGAGCCC TGCAAAAAAA (2) 20.4 0.0204 P8 GC+SHH+1d culture ACTGAAGCAA ACTGGATTAC ACTTCCTTTC GCGCCCTCCC (3) TCCTGAGCCC TGCAAAAAAA (2) 32.8 0.0328 E15 cortex ACTGAAGCAA GCAGACAGGG GCGCCCTCCC (3) GGGAAAGGGG TCCTGAGCCC 29.5 0.0295 Hypothalamus ACTGAAGCAA ACTGGATTAC GCAGACAGGG GCGCCCTCCC (3) TGCAAAAAAA (2) 18.1 0.0181 E12.5 retina ACTGGATTAC GCGCCCTCCC (3) GGGAAAGGGG TCCTGAGCCC TGCAAAAAAA (2) 13.3 0.0133 E14.5 retina ACTGAAGCAA ACTGGATTAC ACTTCCTTTC GCGCCCTCCC (3) TGCAAAAAAA (2) 25.4 0.0254 E16.5 retina ACTGAAGCAA ACTGGATTAC GCGCCCTCCC (3) GGCAAAGCTA (2) GGGAAAGGGG TGCAAAAAAA (2) 39.8 0.0398 E18.5 retina ACTGAAGCAA ACTGGATTAC GCGCCCTCCC (3) TCCTGAGCCC TGCAAAAAAA (2) 61.8 0.0618 P0.5 retina ACTGAAGCAA ACTTCCTTTC TGCAAAAAAA (2) 11.9 0.0119 P2.5 retina ACTGAAGCAA ACTGGATTAC TCCTGAGCCC TGCAAAAAAA (2) 19.4 0.0194 P4.5 retina ACTGAAGCAA ACTGGATTAC TGCAAAAAAA (2) 21.9 0.0219 P6.5 retina ACTGAAGCAA ACTGGATTAC TGCAAAAAAA (2) 16.7 0.0167 P10.5 crx- retina ACTGAAGCAA 13 0.013 P10.5 crx+ retina ACTGAAGCAA ACTGGATTAC TGCAAAAAAA (2) 30.7 0.0307 Adult retinal ACTGAAGCAA GCAGACAGGG GCGCCCTCCC (3) GGCAAAGCTA (2) TCCTGAGCCC TGCAAAAAAA (2) 31.6 0.0316 ONL ACTGAAGCAA TGCAAAAAAA (2) 21.1 0.0211