Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282700	Harsl	histidyl-tRNA synthetase-like	18		70791
Gene Ontology	ATP binding | cytoplasm | extracellular space | histidine-tRNA ligase activity | histidyl-tRNA aminoacylation | protein biosynthesis | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	HARSL[histidyl-tRNA synthetase-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTCTTTGG 8.2 0.0082 Cb medulloblastoma GTGGTGCACA (2) 4.6 0.0046 P8 GC+1d culture AGATGGTGGC GTGGTGCACA (2) 2.2 0.0022 P8 GC+SHH+1d culture GTGGTGCACA (2) TGGTCTTTGG 5.9 0.0059 3T3 fibroblasts GTGGTGCACA (2) 14 0.014 E15 cortex ACCTGGAGAT GTGGTGCACA (2) 29.6 0.0296 P1 cortex GTGGTGCACA (2) 13.6 0.0136 Hypothalamus ACCTGGAGAT AGATGGTGGC GTGGTGCACA (2) TGGTCTTTGG 12.6 0.0126 E12.5 retina GAGTGTTGAA GTGGTGCACA (2) 5.7 0.0057 E14.5 retina AGATGCTCTC GTGGTGCACA (2) 9.1 0.0091 E16.5 retina ACCTGGAGAT AGATGCTCTC GTGGTGCACA (2) 12.6 0.0126 E18.5 retina GTGGTGCACA (2) TGGTCTTTGG 9.1 0.0091 P0.5 retina ACCTGGAGAT AGATGCTCTC GTGGTGCACA (2) TGGTCTTTGG 11.8 0.0118 P2.5 retina ACCTGGAGAT AGATGCTCTC AGATGGTGGC GTGGTGCACA (2) 15.9 0.0159 P4.5 retina ACCTGGAGAT AGATGCTCTC AGATGGTGGC GTGGTGCACA (2) 15.9 0.0159 P6.5 retina ACCTGGAGAT AGATGCTCTC AGATGGTGGC GAGTGTTGAA GTGGTGCACA (2) TGGTCTTTGG 26.7 0.0267 P10.5 crx- retina ACCTGGAGAT AGATGGTGGC 16.8 0.0168 P10.5 crx+ retina ACCTGGAGAT AGATGCTCTC AGATGGTGGC GAGTGTTGAA GTGGTGCACA (2) 19.2 0.0192 Adult retinal AGATGGTGGC GAGTGTTGAA GTGGTGCACA (2) TGGTCTTTGG 16.8 0.0168 ONL AGATGCTCTC GAGTGTTGAA GTGGTGCACA (2) 15.3 0.0153