| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTGTATGTG (2) GGGGACTTTT TAAGATGATA (2)
| 8.1 | 0.0081 |
| Cb medulloblastoma | GGAAATGTTC (3) GGGGACTTTT GTGTCTTCAG (2) TAAGATGATA (2)
| 13.8 | 0.0138 |
| P8 GC+1d culture | CAGGAAATGG (3) GGGGACTTTT TAAAATATAT (3) TAAGATGATA (2)
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | GGAAATGTTC (3) GGGGACTTTT TAAGATGATA (2)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | CCTGTATGTG (2) GTCATAGCTG (2) GTGTCTTCAG (2)
| 17.5 | 0.0175 |
| E15 cortex | CATCTGGGGA (2) GGGGACTTTT GTCATAGCTG (2)
| 24.6 | 0.0246 |
| Hypothalamus | CAGCCGTGCA (2) CAGGAAATGG (3)
| 3.6 | 0.0036 |
| E12.5 retina | AGTTTAAGGC (2) CAGGAAATGG (3) GGGGACTTTT TAAGATGATA (2)
| 7.6 | 0.0076 |
| E14.5 retina | GGGGACTTTT
| 1.8 | 0.0018 |
| E16.5 retina | GGAAATGTTC (3)
| 1.8 | 0.0018 |
| E18.5 retina | CAGCCGTGCA (2) TAAGATGATA (2)
| 7.3 | 0.0073 |
| P0.5 retina | AGTTTAAGGC (2) CAGGAAATGG (3) GGGGACTTTT GTCATAGCTG (2) TAAGATGATA (2)
| 17.8 | 0.0178 |
| P2.5 retina | AGTTTAAGGC (2) CAGCCGTGCA (2) CAGGAAATGG (3) GGGGACTTTT GTCATAGCTG (2) GTGTCTTCAG (2) TAAGATGATA (2) TAAGTAAGAG (2)
| 23.1 | 0.0231 |
| P4.5 retina | CAGGAAATGG (3) GGGGACTTTT GTCATAGCTG (2) TAAGATGATA (2) TAAGTAAGAG (2)
| 17.9 | 0.0179 |
| P6.5 retina | GGGGACTTTT GTCATAGCTG (2)
| 5 | 0.005 |
| P10.5 crx- retina | CCTGTATGTG (2) TAAAATATAT (3)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | AGTTTAAGGC (2) CAGCCGTGCA (2) GGGGACTTTT GTGTCTTCAG (2) TAAGATGATA (2)
| 13.3 | 0.0133 |
| Adult retinal | CAGGAAATGG (3) GGGGACTTTT GTCATAGCTG (2) GTGTCTTCAG (2)
| 11.2 | 0.0112 |
| ONL | AGTTTAAGGC (2) GTCATAGCTG (2) TAAAATATAT (3) TAAGTAAGAG (2)
| 13.3 | 0.0133 |