Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28520	AA408705	expressed sequence AA408705	4	4 83.0 cM	99977
Mm.28520	Ski	Sloan-Kettering viral oncogene homolog	4	4 78.9 cM	20481
Gene Ontology	cell growth and/or maintenance | cytoplasm | limb morphogenesis | nucleus | protein binding | transcriptional repressor complex
Human Homolog	SKI[v-ski sarcoma viral oncogene homolog (avian)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATACAAGTT (2) TAAAAAAAAA (3) 48.9 0.0489 Cb medulloblastoma CATACAAGTT (2) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC 115.6 0.1156 P8 GC+1d culture ATAGCAGGTC (2) CTCATCAATT (3) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC 76.4 0.0764 P8 GC+SHH+1d culture CTCATCAATT (3) GGCATTATGA (2) GGGCTGGTAG TAAAAAAAAA (3) TGCTACACAC 104.3 0.1043 3T3 fibroblasts GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC 21 0.021 E15 cortex TAAAAAAAAA (3) TGCTACACAC 14.8 0.0148 P1 cortex CTCATCAATT (3) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC 63.5 0.0635 Hypothalamus GGCATTATGA (2) TAAAAAAAAA (3) TGGCCTGCTC 39.8 0.0398 E12.5 retina CTCATCAATT (3) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC 35.7 0.0357 E14.5 retina CATACAAGTT (2) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC TTTTTTAATG (2) 49.1 0.0491 E16.5 retina GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC TGGCCTGCTC 36.1 0.0361 E18.5 retina GGCATCCTGC (2) TAAAAAAAAA (3) TGCTACACAC 110.9 0.1109 P0.5 retina CTCATCAATT (3) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC 49.1 0.0491 P2.5 retina GGCATCCTGC (2) GGCATTATGA (2) GGGCTGGTAG TAAAAAAAAA (3) TGCTACACAC 84.5 0.0845 P4.5 retina CTCATCAATT (3) GGCATCCTGC (2) GGCATTATGA (2) TAAAAAAAAA (3) TGCTACACAC TTTTTTAATG (2) 136.7 0.1367 P6.5 retina CTCATCAATT (3) GGCATTATGA (2) GGGCTGGTAG TAAAAAAAAA (3) TGCTACACAC 76.8 0.0768 P10.5 crx- retina TAAAAAAAAA (3) TGGCCTGCTC TTTTTTAATG (2) 14.9 0.0149 P10.5 crx+ retina ATAGCAGGTC (2) CATACAAGTT (2) TAAAAAAAAA (3) TGCTACACAC 32.6 0.0326 Adult retinal TAAAAAAAAA (3) TGCTACACAC 20.4 0.0204 ONL CTCATCAATT (3) TAAAAAAAAA (3) 30.6 0.0306