Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288630	Calm3	calmodulin 3	7	7 4.0 cM	12315
Gene Ontology	calcium ion binding | cell cycle | cytoplasm | G-protein coupled receptor protein signaling pathway | plasma membrane | protein binding
Human Homolog	CALM3[calmodulin 3 (phosphorylase kinase, delta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACGAACCTGG ACTGCTCTCT (2) ATCCGCACCC ATGGCCAGAA CACCCCAGCC (4) CCCGTTCTCC CCGCTCCCCC 40.8 0.0408 Cb medulloblastoma ACGAACCTGG ACTGCTCTCT (2) ATCCGCACCC CCCGTTCTCC CCTGCCTGGG CTCACAAGAA (2) TCCTGCAGCT TTTAGGACAA 39.2 0.0392 P8 GC+1d culture ACTGCTCTCT (2) ATCCGCACCC CCCGTTCTCC CTTCCAAAAA (8) GCCAGCTGCC TCCCGCTGCT TTTAGGACAA 52.4 0.0524 P8 GC+SHH+1d culture ATCCGCACCC CAGCCTGGGA CCCGTTCTCC CTCACAAGAA (2) TCCCGCTGCT TCCTGCAGCT TTTAGGACAA 46.8 0.0468 3T3 fibroblasts ATCCGCACCC CACCCCAGCC (4) CCCGTTCTCC CCTGCCTGGG 45.5 0.0455 E15 cortex ACGAACCTGG ATCCGCACCC CACCCCAGCC (4) CCCGTTCTCC TCCAGACCTG (2) 98.8 0.0988 P1 cortex ATCCGCACCC CCCGTTCTCC TCCAGACCTG (2) 59.1 0.0591 Hypothalamus ACTGCTCTCT (2) ATCCGCACCC CCCGTTCTCC CCGCTCCCCC CTCACAAGAA (2) CTTCCAAAAA (8) GCCAGCTGCC 41.6 0.0416 E12.5 retina CACCCCAGCC (4) CAGCCTGGGA CCCGTTCTCC CCTGCCTGGG TGAGACATTC 15.1 0.0151 E14.5 retina ATCCGCACCC CCCGTTCTCC CCTGCCTGGG TGAGACATTC 16.3 0.0163 E16.5 retina ACGAACCTGG ACTGCTCTCT (2) ATCCGCACCC CCCGTTCTCC CCTGCCTGGG GCCAGCTGCC 19.9 0.0199 E18.5 retina ATCCGCACCC CACCCCAGCC (4) CCCGTTCTCC CTTCCAAAAA (8) TCCCGCTGCT TGAGACATTC 19.9 0.0199 P0.5 retina ATCCGCACCC CCCGTTCTCC CCTGCCTGGG TCCTGCAGCT TGAGACATTC 27.6 0.0276 P2.5 retina ACGAACCTGG ATCCGCACCC CCCGTTCTCC TGAGACATTC 12.4 0.0124 P4.5 retina ATCCGCACCC CACCCCAGCC (4) CCCGTTCTCC CTTCCAAAAA (8) 19.8 0.0198 P6.5 retina ATCCGCACCC CCCGTTCTCC TGAGACATTC 13.3 0.0133 P10.5 crx- retina ACGAACCTGG ACTGCTCTCT (2) ATCCGCACCC CACCCCAGCC (4) CCCGTTCTCC CTCACAAGAA (2) TCCAGACCTG (2) TCCCGCTGCT 63.4 0.0634 P10.5 crx+ retina ACGAACCTGG ACTGCTCTCT (2) ATCCGCACCC CACCCCAGCC (4) CCCGTTCTCC TCCCGCTGCT TTTAGGACAA 36.4 0.0364 Adult retinal ATCCGCACCC ATGGCCAGAA CACCCCAGCC (4) CCCGTTCTCC CCTGCCTGGG TCCTGCAGCT 24.2 0.0242 ONL ATCCGCACCC CCCGTTCTCC CCTGCCTGGG TTTAGGACAA 15.2 0.0152