Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288897	Chpt1	choline phosphotransferase 1	10		212862
Gene Ontology	biological_process unknown | cellular_component unknown | transferase activity
Human Homolog	CHPT1[choline phosphotransferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGAAATA (2) GGGAAAAAAA (5) TGTCATTTAA (2) TTTAATTTTT (2) 17.9 0.0179 Cb medulloblastoma AAAAGAAATA (2) GGGAAAAAAA (5) GTGGATCACA TGTCATTTAA (2) 141 0.141 P8 GC+1d culture AAAAGAAATA (2) AAGTCTTGAA GGGAAAAAAA (5) GTGGATCACA TTTAATTTTT (2) 17 0.017 P8 GC+SHH+1d culture AAAAGAAATA (2) GCGGCGGGCG GGGAAAAAAA (5) GTGGATCACA 16.4 0.0164 E15 cortex GTGGATCACA 4.9 0.0049 P1 cortex AAAAGAAATA (2) GGGAAAAAAA (5) 9 0.009 Hypothalamus AAAAGAAATA (2) AAGTCTTGAA GGGAAAAAAA (5) GTGGATCACA TGTCATTTAA (2) 72.5 0.0725 E12.5 retina AAAAGAAATA (2) GCGGCGGGCG GTGGATCACA TGTCATTTAA (2) 16.9 0.0169 E14.5 retina AAAAGAAATA (2) GGGAAAAAAA (5) GTGGATCACA TCAACAAGCA 32.7 0.0327 E16.5 retina AAAAGAAATA (2) GCGGCGGGCG GGGAAAAAAA (5) GTGGATCACA 34.3 0.0343 E18.5 retina AAAAGAAATA (2) GGAAAAAAAT (2) GGGAAAAAAA (5) 30.9 0.0309 P0.5 retina AAAAGAAATA (2) GGGAAAAAAA (5) GTGGATCACA 7.9 0.0079 P2.5 retina AAAAGAAATA (2) GGAAAAAAAT (2) GGGAAAAAAA (5) TTTAATTTTT (2) 24.7 0.0247 P4.5 retina AAAAGAAATA (2) GGGAAAAAAA (5) GTGGATCACA TGTCATTTAA (2) 31.7 0.0317 P6.5 retina AAAAGAAATA (2) AAGTCTTGAA GGAAAAAAAT (2) GGGAAAAAAA (5) GTGGATCACA TTTAATTTTT (2) 58.4 0.0584 P10.5 crx- retina AAAAGAAATA (2) GGGAAAAAAA (5) 14.8 0.0148 P10.5 crx+ retina AAAAGAAATA (2) GGGAAAAAAA (5) GTGGATCACA 30.8 0.0308 Adult retinal GCGGCGGGCG GGGAAAAAAA (5) GTGGATCACA 40.8 0.0408 ONL AAAAGAAATA (2) GGAAAAAAAT (2) GGGAAAAAAA (5) GTGGATCACA 47.8 0.0478