Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288924	Ube4b	ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	4	4 76.4 cM	63958
Gene Ontology	protein binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity
Human Homolog	UBE4B[ubiquitination factor E4B (UFD2 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATTAATCAA TAAACAAGCA (2) 14.7 0.0147 Cb medulloblastoma AATAATAAAA (3) ATTAATAAAA GCCCGACAAC 6.9 0.0069 P8 GC+1d culture AATTAATCAA GCCCGACGAC TAAACAAGCA (2) TAAAGTAAGA TATTCTGTGC TCATCTAACA (2) 15.8 0.0158 P8 GC+SHH+1d culture AATAATAAAA (3) AATTAATCAA ATTAATAAAA CTGGAGCCAG (2) GCCCGACAAC GCCCGACGAC TAAACAAGCA (2) TAAAGTAAGA TCATCTAACA (2) 26.8 0.0268 3T3 fibroblasts GTCATAGCTG (2) 10.5 0.0105 E15 cortex GCACTTCCAG GCCCGACAAC GTCATAGCTG (2) TATTCTGTGC 44.4 0.0444 P1 cortex AATAATAAAA (3) AATTAATCAA ATTAATAAAA TAAACAAGCA (2) 18 0.018 Hypothalamus AATAATAAAA (3) TAAACAAGCA (2) 9 0.009 E12.5 retina AATAATAAAA (3) AATTAATCAA ATTAATAAAA CTGGAGCCAG (2) TAAACAAGCA (2) 20.7 0.0207 E14.5 retina AATTAATCAA ATTAATAAAA GCAGGAGTCC TAAACAAGCA (2) 18.2 0.0182 E16.5 retina GCCCGACAAC TAAACAAGCA (2) 5.4 0.0054 E18.5 retina AATTAATCAA TAAACAAGCA (2) TATTCTGTGC 5.4 0.0054 P0.5 retina AATTAATCAA ATTAATAAAA CTGGAGCCAG (2) GCCCGACAAC GTCATAGCTG (2) 13.8 0.0138 P2.5 retina AATAATAAAA (3) AATTAATCAA GTCATAGCTG (2) 12.4 0.0124 P4.5 retina AATTAATCAA ATTAATAAAA GTCATAGCTG (2) TAAACAAGCA (2) 8 0.008 P6.5 retina AATTAATCAA ATTAATAAAA GCAGGAGTCC GTCATAGCTG (2) TAAACAAGCA (2) 10.1 0.0101 P10.5 crx- retina AATTAATCAA GCCCGACAAC TAAACAAGCA (2) TATTCTGTGC 7.6 0.0076 P10.5 crx+ retina GCCCGACAAC 1.9 0.0019 Adult retinal GCACTTCCAG GCAGGAGTCC GTCATAGCTG (2) TAAACAAGCA (2) 7.6 0.0076 ONL GCACTTCCAG GTCATAGCTG (2) TAAACAAGCA (2) TAAAGTAAGA 17.2 0.0172