Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289248	Tceb1	transcription elongation factor B (SIII), polypeptide 1	1		67923
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	TCEB1[transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 132 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATTGCAG GCTTTAATTA (3) TAATTATTGG TATTTTACCT (2) TGAGGGGATC TTGCCTGTAT TTTATAACTT 31.1 0.0311 Cb medulloblastoma AAAATTGCAG ACTTTATATG TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TGAGGGGATC TGCCATCAAA (4) TTGCCTGTAT TTTATAACTT 55.4 0.0554 P8 GC+1d culture AAAATTGCAG TAATTATTGG TATTTTACCT (2) TTGCCTGTAT TTTATAACTT 29.7 0.0297 P8 GC+SHH+1d culture AAAATTGCAG GCTTTAATTA (3) TAATTATTGG TATTTTACCT (2) TGCCATCAAA (4) TTTATAACTT 12.9 0.0129 3T3 fibroblasts GTCATAGCTG (2) TGGGTGCTTG 14 0.014 E15 cortex GTCATAGCTG (2) TTGCCTGTAT 14.8 0.0148 P1 cortex ACTTTATATG TAATTATTGG TCTTGAAACA TGCCATCAAA (4) TGGGTGCTTG TTTATAACTT 63.5 0.0635 Hypothalamus AAAATTGCAG ACTTTATATG GCCATCAGAA TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TGAGGGGATC TGCCATCAAA (4) TGGGTGCTTG TTTATAACTT 139.3 0.1393 E12.5 retina AAAATTGCAG TAATTATTGG TAATTATTTG (5) TGAGGGGATC 13.2 0.0132 E14.5 retina AAAATTGCAG GCCATCAGAA TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TCTTGAAACA TGAGGGGATC TGCCATCAAA (4) TTGCCTGTAT 45.4 0.0454 E16.5 retina AAAATTGCAG GCCATCAGAA GCTTTAATTA (3) TAATTATTGG TATTTTACCT (2) TATTTTGTTA (2) TGGGTGCTTG TTGCCTGTAT TTTATAACTT 47 0.047 E18.5 retina AAAATTGCAG TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TATTTTGTTA (2) TGCCATCAAA (4) TTTATAACTT 29 0.029 P0.5 retina AAAATTGCAG GTCATAGCTG (2) TAATTATTGG TATTTTGTTA (2) 17.6 0.0176 P2.5 retina AAAATTGCAG GCCATCAGAA GTCATAGCTG (2) TAATTATTGG TATTTTACCT (2) TATTTTGTTA (2) TTTATAACTT 23.1 0.0231 P4.5 retina AAAATTGCAG GCCATCAGAA GTCATAGCTG (2) TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TATTTTGTTA (2) TGAGGGGATC TGCCATCAAA (4) TGGGTGCTTG TTGCCTGTAT TTTATAACTT 45.7 0.0457 P6.5 retina AAAATTGCAG GTCATAGCTG (2) TAATTATTGG TATTTTGTTA (2) TGCCATCAAA (4) TTGCCTGTAT TTTATAACTT 23.4 0.0234 P10.5 crx- retina AAAATTGCAG TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TATTTTGTTA (2) TGAGGGGATC TGCCATCAAA (4) 28 0.028 P10.5 crx+ retina AAAATTGCAG TAATTATTGG TAATTATTTG (5) TATTTTACCT (2) TATTTTGTTA (2) TGCCATCAAA (4) TTTATAACTT 22.9 0.0229 Adult retinal AAAATTGCAG GTCATAGCTG (2) TAATTATTGG TTGCCTGTAT 18.6 0.0186 ONL AAAATTGCAG GTCATAGCTG (2) TAATTATTGG TATTTTACCT (2) TATTTTGTTA (2) TCTTGAAACA TGCCATCAAA (4) TGGGTGCTTG 28.6 0.0286