Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.289490 Nr1d1nuclear receptor subfamily 1, group D, member 1 11    217166 
 Gene Ontology circadian rhythm | DNA binding | nucleus | receptor activity | regulation of transcription, DNA-dependent | transcription factor activity
 Human Homolog NR1D1[nuclear receptor subfamily 1, group D, member 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGCGGGGGGGG (2)
TCTGTAGCCC (2)
310.031
Cb medulloblastomaCTCCCATCCT (4)
GACACCGTCC
GCGGGGGGGG (2)
GGGGGGGGGG
TCTGTAGCCC (2)
76.20.0762
P8 GC+1d cultureAGTCTGTTTC
CATTCCGAGA (2)
CCACTCGTGG
CCCGTCTGCC (3)
CTCCCATCCT (4)
GACACCGTCC
GCCACAGGCT
GCGGTGGGGG
GGGGGGGGGG
TCTGTAGCCC (2)
59.20.0592
P8 GC+SHH+1d cultureAGTCTGTTTC
CCACTCGTGG
CTCCCATCCT (4)
GCAGCTTCCA (2)
GCGGTGGGGG
GGGGGGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
46.90.0469
3T3 fibroblastsCCACTCGTGG
CTCCCATCCT (4)
GCAGCTTCCA (2)
GGGGGGGGGG
TCTGTAGCCC (2)
24.50.0245
E15 cortexCCCGTCTGCC (3)
GACACCGTCC
GCGGTGGGGG
GGGGGGGGGG
TCTGTAGCCC (2)
840.084
P1 cortexAGTCTGTTTC
CCACTCGTGG
CCCGTCTGCC (3)
CTTCTTGTGT (2)
GACACCGTCC
TCTGTAGCCC (2)
1270.127
HypothalamusAGTCTGTTTC
CATTCCGAGA (2)
CCACTCGTGG
CTCCCATCCT (4)
CTTCTTGTGT (2)
GAAGACAGCA
GACACCGTCC
GCCACAGGCT
GGGGGGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
66.90.0669
E12.5 retinaCTTCTTGTGT (2)
GCGGGGGGGG (2)
TCTGTAGCCC (2)
16.90.0169
E14.5 retinaCTTCTTGTGT (2)
GCAGCTTCCA (2)
TCTGTAGCCC (2)
27.30.0273
E16.5 retinaAGTCTGTTTC
CTTCTTGTGT (2)
GCCACAGGCT
TCTGTAGCCC (2)
61.50.0615
E18.5 retinaAGTCTGTTTC
TCTGTAGCCC (2)
41.80.0418
P0.5 retinaAGTCTGTTTC
CTTCTTGTGT (2)
GAAGACAGCA
GACACCGTCC
GCGGTGGGGG
TCTGTAGCCC (2)
590.059
P2.5 retinaCATTCCGAGA (2)
GAAGACAGCA
GCGGTGGGGG
GGGGGGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
72.20.0722
P4.5 retinaAGTCTGTTTC
CTCCCATCCT (4)
CTTCTTGTGT (2)
GCGGTGGGGG
GGGGGGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
81.30.0813
P6.5 retinaAGTCTGTTTC
CATTCCGAGA (2)
CTTCTTGTGT (2)
GCGGGGGGGG (2)
GCGGTGGGGG
GGGGGGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
104.90.1049
P10.5 crx- retinaCATTCCGAGA (2)
CCACTCGTGG
CTCCCATCCT (4)
CTTCTTGTGT (2)
GCCACAGGCT
GCGGTGGGGG
TCTGTAGCCC (2)
107.90.1079
P10.5 crx+ retinaCTCCCATCCT (4)
GCGGGGGGGG (2)
GGGGGGGGGG
TCTGTAGCCC (2)
76.80.0768
Adult retinalCATTCCGAGA (2)
CCCGTCTGCC (3)
CTCCCATCCT (4)
GCGGTGGGGG
GGGGGGGGGG
TCTGTAGCCC (2)
42.80.0428
ONLAGTCTGTTTC
GGGGGGGGGG
TCTGTAGCCC (2)
15.30.0153