| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACCCTATC (2) AAACCCTATT ATTCCGAATT (2) GCGCTTGCAC GGCACCCTGC TAGCCCAGGC (2) TATAGCACTT TTAGAGGCAA TTTTTTTTTT (2)
| 24.4 | 0.0244 |
| Cb medulloblastoma | AAAAACATAA GCGCTTGCAC TAGCCCAGGC (2) TTAGAGGCAA TTTTTTTTTT (2)
| 16.1 | 0.0161 |
| P8 GC+1d culture | AAAAACATAA AAACCCTATC (2) AAACCCTATT GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTAGAGGCAA TTTTTTTTTT (2)
| 26.1 | 0.0261 |
| P8 GC+SHH+1d culture | AAAAACATAA AAACCCTATC (2) ATAAAGAAAA (2) GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTGAGGAAAT TTTTTTTTTT (2)
| 32.9 | 0.0329 |
| 3T3 fibroblasts | GCGCTTGCAC TAGCCCAGGC (2)
| 17.5 | 0.0175 |
| E15 cortex | TAGCCCAGGC (2) TTTTTTTTTT (2)
| 29.6 | 0.0296 |
| P1 cortex | AAACCCTATC (2) TTTTTTTTTT (2)
| 9 | 0.009 |
| Hypothalamus | AAAAACATAA AAACCCTATC (2) CTGAGCTTGG (2) GCGCTTGCAC TAGCCCAGGC (2) TTGAGGAAAT TTTTTTTTTT (2)
| 34.3 | 0.0343 |
| E12.5 retina | AAACCCTATC (2) GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 26.3 | 0.0263 |
| E14.5 retina | AAACCCTATC (2) ATAAAGAAAA (2) GCGCTTGCAC TAGCCCAGGC (2) TTTTTTTTTT (2)
| 51 | 0.051 |
| E16.5 retina | TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 16.2 | 0.0162 |
| E18.5 retina | AAACCCTATC (2) AAACCCTATT CTGAGCTTGG (2) GCGCTTGCAC TAGCCCAGGC (2) TTTTTTTTTT (2)
| 30.9 | 0.0309 |
| P0.5 retina | AAACCCTATC (2) GCGCTTGCAC TAGCCCAGGC (2) TTTTTTTTTT (2)
| 21.6 | 0.0216 |
| P2.5 retina | AAACCCTATC (2) ATAAAGAAAA (2) CTGAGCTTGG (2) GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 28.2 | 0.0282 |
| P4.5 retina | AAAAACATAA AAACCCTATC (2) ATTCCGAATT (2) CTGAGCTTGG (2) GCGCTTGCAC TAGCCCAGGC (2) TTTTTTTTTT (2)
| 29.8 | 0.0298 |
| P6.5 retina | AAACCCTATC (2) ATTCCGAATT (2) CTGAGCTTGG (2) GCGCTTGCAC GGCACCCTGC TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 41.7 | 0.0417 |
| P10.5 crx- retina | GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTAGAGGCAA
| 11.3 | 0.0113 |
| P10.5 crx+ retina | AAACCCTATC (2) GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 19 | 0.019 |
| Adult retinal | ATAAAGAAAA (2) GCGCTTGCAC TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 16.8 | 0.0168 |
| ONL | AAAAACATAA AAACCCTATC (2) ATTCCGAATT (2) CTGAGCTTGG (2) TAGCCCAGGC (2) TATAGCACTT TTTTTTTTTT (2)
| 24.8 | 0.0248 |