Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29027	Sparcl1	SPARC-like 1 (mast9, hevin)	5	5 E4 (5 55.0 cM)	13602
Gene Ontology	calcium ion binding | extracellular matrix | extracellular space
Human Homolog	SPARCL1[SPARC-like 1 (mast9, hevin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGATGTGC (2) CATTAAGCTG CTGAAGAAGT (5) CTGAGGAAGT GAACACTGCA GCGGCTATCT GGAAAAAAAA (2) TGAGAGAAGA (2) TTGTCACCTC 97.8 0.0978 Cb medulloblastoma AAGGATGTGC (2) CTGAAGAAGT (5) CTGAGGAAGT GAACACTGCA GCGGCTATCT GGAAAAAAAA (2) GTGGCTAACT TTGTCACCTC 249.6 0.2496 P8 GC+1d culture AAGGATGTGC (2) CATTAAGCTG CTGAGGAAGT GCGGCTATCT GGAAAAAAAA (2) TTGTCACCTC 41 0.041 P8 GC+SHH+1d culture AAAGCTGTGC (2) AAGGATGTGC (2) CATTAAGCTG CTGAGGAAGT CTGTGGAACT GGAAAAAAAA (2) TGCTAAGTCC (2) TTGTCACCTC 45.8 0.0458 3T3 fibroblasts AAGGATGTGC (2) 24.5 0.0245 E15 cortex AAGGATGTGC (2) CTGAGGAAGT GGAAAAAAAA (2) 29.7 0.0297 P1 cortex AAGGATGTGC (2) CTGAAGAAGT (5) CTGAGGAAGT GGAAAAAAAA (2) TTGTCACCTC 49.9 0.0499 Hypothalamus AAGGATGTGC (2) CATTAAGCTG CTGAAGAAGT (5) CTGAGGAAGT GGAAAAAAAA (2) GGTGCAGGGG (2) GTGGCTAACT TGAGAGAAGA (2) TGCTAAGTCC (2) TTGTCACCTC TTGTGAACAC 171.9 0.1719 E12.5 retina AAAGCTGTGC (2) AAGGATGTGC (2) CATTAAGCTG CTGTGGAACT GGAAAAAAAA (2) TTGTCACCTC 33.8 0.0338 E14.5 retina AAGGATGTGC (2) GGAAAAAAAA (2) GGTGCAGGGG (2) TTGTCACCTC TTGTGAACAC 34.6 0.0346 E16.5 retina AAGGATGTGC (2) CTGAGGAAGT GGAAAAAAAA (2) TTGTCACCTC 23.5 0.0235 E18.5 retina AAGGATGTGC (2) GAACACTGCA GGAAAAAAAA (2) TTGTCACCTC 43.8 0.0438 P0.5 retina AAGGATGTGC (2) GAAATGCAAT GGAAAAAAAA (2) TTGTCACCTC 39.2 0.0392 P2.5 retina AAGGATGTGC (2) CATTAAGCTG CTGAGGAAGT GGAAAAAAAA (2) TTGTCACCTC 24.6 0.0246 P4.5 retina AAGGATGTGC (2) GGAAAAAAAA (2) TTGTCACCTC 25.8 0.0258 P6.5 retina AAAGCTGTGC (2) AAGGATGTGC (2) CTGAAGAAGT (5) CTGAGGAAGT CTGTGGAACT GAAATGCAAT GGAAAAAAAA (2) GGTGCAGGGG (2) TTGTCACCTC 43.5 0.0435 P10.5 crx- retina AAGGATGTGC (2) CTGAGGAAGT CTGTGGAACT GGAAAAAAAA (2) GTGGCTAACT TGAGAGAAGA (2) 100.4 0.1004 P10.5 crx+ retina AAGGATGTGC (2) CTGAGGAAGT GGAAAAAAAA (2) TTGTCACCTC 67.3 0.0673 Adult retinal AAGGATGTGC (2) CTGAGGAAGT GAAATGCAAT GAACACTGCA GGAAAAAAAA (2) TGCTAAGTCC (2) TTGTCACCTC TTGTGAACAC 59.6 0.0596 ONL AAAGCTGTGC (2) AAGGATGTGC (2) CATTAAGCTG CTGAGGAAGT GGAAAAAAAA (2) GTGGCTAACT TTGTCACCTC TTGTGAACAC 40.1 0.0401