Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290610	Notch1	Notch gene homolog 1 (Drosophila)	2	2 A3 (2 15.0 cM)	18128
Gene Ontology	calcium ion binding | cell differentiation | cell fate specification | compartment specification | determination of left/right symmetry | development | DNA binding | endoderm development | extracellular space | heart development | integral to membrane | keratinocyte differentiation | membrane | N signaling pathway | positive regulation of apoptosis | positive regulation of transcription from Pol II promoter | protein binding | receptor activity | regulation of development | regulation of transcription, DNA-dependent | somatic stem cell renewal | transcription factor activity
Human Homolog	NOTCH1[Notch homolog 1, translocation-associated (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAACTGTA (2) GCACTGCCCT (5) GGGGCACCTG (3) 9.8 0.0098 Cb medulloblastoma CCAAGGCTCC 4.6 0.0046 P8 GC+1d culture CAAAACTGTA (2) CACTGTGTGG GAAAGGGTGG (2) GCACTGCCCT (5) GGGGCACCTG (3) 7.9 0.0079 P8 GC+SHH+1d culture CAAAACTGTA (2) GCACTGCCCT (5) TAGTTTTTTT (2) 5.9 0.0059 3T3 fibroblasts CACTGTGTGG GCACTGCCCT (5) GGGGCACCTG (3) 28 0.028 E15 cortex GGGGCACCTG (3) 9.9 0.0099 P1 cortex CAAAACTGTA (2) GGGGCACCTG (3) 9 0.009 Hypothalamus CCAAGGCTCC 9.1 0.0091 E12.5 retina CAAAACTGTA (2) 16.9 0.0169 E14.5 retina CAAAACTGTA (2) GAAAGGGTGG (2) TAGTTTTTTT (2) 23.6 0.0236 E16.5 retina ATTACGCCAA CAAAACTGTA (2) GAAAGGGTGG (2) 23.5 0.0235 E18.5 retina CAAAACTGTA (2) GGGGCACCTG (3) 32.7 0.0327 P0.5 retina ATTACGCCAA CAAAACTGTA (2) CACTGTGTGG CCGTCCCAGA GGGGCACCTG (3) 35.5 0.0355 P2.5 retina CAAAACTGTA (2) CCGTCCCAGA GGGGCACCTG (3) 49.4 0.0494 P4.5 retina CAAAACTGTA (2) CCGTCCCAGA 59.5 0.0595 P6.5 retina CAAAACTGTA (2) CACTGTGTGG GGGGCACCTG (3) 15.1 0.0151 P10.5 crx- retina CAAAACTGTA (2) 7.4 0.0074 P10.5 crx+ retina CAAAACTGTA (2) 1.9 0.0019 Adult retinal ATTACGCCAA CCAAGGCTCC 5.6 0.0056 ONL CAAAACTGTA (2) 3.8 0.0038