Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29135	Snrpd2	small nuclear ribonucleoprotein D2	7		107686
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | ribonucleoprotein complex | small nucleolar ribonucleoprotein complex | spliceosome assembly | spliceosome complex
Human Homolog	SNRPD2[small nuclear ribonucleoprotein D2 polypeptide 16.5kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCCTGCCC (3) GTGCTGGAAA GTGCTGGTAA (2) 24.4 0.0244 Cb medulloblastoma CTCCCTGCCC (3) GTGCTGGAAA GTGCTGGTAA (2) 27.7 0.0277 P8 GC+1d culture CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA 20.5 0.0205 P8 GC+SHH+1d culture CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGTAA (2) TTGCAGTGCC 32.9 0.0329 3T3 fibroblasts CTCCCTGCCC (3) GTGCTGGAAA 14 0.014 E15 cortex CTCCCTGCCC (3) GTGCTGGAAA 39.6 0.0396 P1 cortex CTCCCTGCCC (3) GTGCTGGAAA 22.7 0.0227 Hypothalamus GTGCTGGAAA GTGCTGGTAA (2) GTGTAGGTTT 10.8 0.0108 E12.5 retina CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGTAA (2) 39.4 0.0394 E14.5 retina GTGCTAGAAA GTGCTGGAAA GTGCTGGTAA (2) GTGTAGGTTT TTGCAGTGCC 21.7 0.0217 E16.5 retina AGTCTCCTCA (2) CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGGAA GTGCTGGTAA (2) GTGTAGGTTT TTGCAGTGCC 41.6 0.0416 E18.5 retina AGTCTCCTCA (2) CTCCCTGCCC (3) GTGCTGGAAA GTGCTGGTAA (2) GTGTAGGTTT TTGCAGTGCC 27.2 0.0272 P0.5 retina CTCCCTGCCC (3) GTGCTGGAAA GTGCTGGTAA (2) TTGCAGTGCC 35.4 0.0354 P2.5 retina CTCCCTGCCC (3) GTGCTGGAAA GTGCTGGTAA (2) 22.9 0.0229 P4.5 retina CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA 15.8 0.0158 P6.5 retina CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGGAA GTGCTGGTAA (2) 21.7 0.0217 P10.5 crx- retina AGTCTCCTCA (2) CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGTAA (2) 39.1 0.0391 P10.5 crx+ retina CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGTAA (2) 21.1 0.0211 Adult retinal CTCCCTGCCC (3) GTGCTGGAAA TTGCAGTGCC 11.2 0.0112 ONL CTCCCTGCCC (3) GTGCTAGAAA GTGCTGGAAA GTGCTGGGAA 19.1 0.0191