Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291554	Prkci	protein kinase C, iota	3	3 A3 (3 13.8 cM)	18759
Gene Ontology	apical part of cell | ATP binding | diacylglycerol binding | intracellular signaling cascade | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PRKCI[protein kinase C, iota]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTCAGGAA (2) GTCACAAACT TAGAACACTG TTGAAGTGTG (2) 13 0.013 Cb medulloblastoma AAAAAAATTA (2) TAGAACACTG TTGAAGTGTG (2) 18.5 0.0185 P8 GC+1d culture AAAAAAATTA (2) CATTTGTCAA GCACTTAAGG GGTTCAGGAA (2) GTCACAAACT TACAGTGTCT TAGAACACTG TTGAAGTGTG (2) 18.2 0.0182 P8 GC+SHH+1d culture GTCACAAACT TACAGTGTCT TAGAACACTG TTGAAGTGTG (2) 14 0.014 3T3 fibroblasts TAGAACACTG TTGAAGTGTG (2) 7 0.007 E15 cortex GGTTCAGGAA (2) TAGAACACTG 9.8 0.0098 P1 cortex AAAAAAATTA (2) 4.5 0.0045 Hypothalamus GGTTCAGGAA (2) TAGAACACTG 3.6 0.0036 E12.5 retina TAGAACACTG 5.6 0.0056 E14.5 retina AAAAAAATTA (2) TAGAACACTG TTGAAGTGTG (2) 7.2 0.0072 E16.5 retina TAGAACACTG TGATACAGAG (3) TTGAAGTGTG (2) 5.4 0.0054 E18.5 retina GCACTTAAGG TAGAACACTG TGATACAGAG (3) 23.6 0.0236 P0.5 retina GGTTCAGGAA (2) TACAGTGTCT 4 0.004 P2.5 retina AAAAAAATTA (2) GCACTTAAGG TAGAACACTG TTGAAGTGTG (2) 26.4 0.0264 P4.5 retina GGTTCAGGAA (2) TACAGTGTCT TAGAACACTG TTGAAGTGTG (2) 17.8 0.0178 P6.5 retina GCACTTAAGG GGTTCAGGAA (2) TAGAACACTG TGATACAGAG (3) 8.4 0.0084 P10.5 crx- retina GCACTTAAGG GGTTCAGGAA (2) TAGAACACTG 11.2 0.0112 P10.5 crx+ retina GCACTTAAGG GTCACAAACT TAGAACACTG TTGAAGTGTG (2) 7.6 0.0076 Adult retinal TAGAACACTG TTGAAGTGTG (2) 5.6 0.0056 ONL GTCACAAACT TGATACAGAG (3) TTGAAGTGTG (2) 9.5 0.0095