| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGAGATTA (2) GCCTCCCCTT (2) GGGGGAAACA (2) TAAAAATTCC
| 31 | 0.031 |
| Cb medulloblastoma | AAGGAGATTA (2) GGGGGAAACA (2) TGAGCGTGTG (3)
| 23.1 | 0.0231 |
| P8 GC+1d culture | AAGGAGATTA (2) AGATCCAGAA (2) GCCTCCCCTT (2) GGGGGAAACA (2)
| 31.9 | 0.0319 |
| P8 GC+SHH+1d culture | AAGGAGATTA (2) GCCTCCCCTT (2) GGGGGAAACA (2) TAAAAATTCC TGAACAGTGG (2)
| 37.5 | 0.0375 |
| 3T3 fibroblasts | GCCTCCCCTT (2)
| 7 | 0.007 |
| E15 cortex | AAGGAGATTA (2) GCCTCCCCTT (2) GGGGGAAACA (2)
| 29.6 | 0.0296 |
| P1 cortex | AAGGAGATTA (2) GCCTCCCCTT (2) GGGGGAAACA (2) TAAAAATTCC
| 22.6 | 0.0226 |
| Hypothalamus | GGGGGAAACA (2) TAAAAATTCC
| 7.2 | 0.0072 |
| E12.5 retina | GCCTCCCCTT (2) GGGGGAAACA (2) TGAACAGTGG (2)
| 17 | 0.017 |
| E14.5 retina | AAGGAGATTA (2) GGGGGAAACA (2)
| 14.6 | 0.0146 |
| E16.5 retina | CGTCATCGTG (2) GCCTCCCCTT (2) GGGGGAAACA (2) TAAAAATTCC
| 27.1 | 0.0271 |
| E18.5 retina | GGGGGAAACA (2) TAAAAATTCC
| 23.6 | 0.0236 |
| P0.5 retina | GCCTCCCCTT (2) GGGGGAAACA (2)
| 21.6 | 0.0216 |
| P2.5 retina | AAGGAGATTA (2) GGGGGAAACA (2) TAAAAATTCC
| 15.9 | 0.0159 |
| P4.5 retina | AAGGAGATTA (2) CGTCATCGTG (2) GCCTCCCCTT (2) GGGGGAAACA (2)
| 25.8 | 0.0258 |
| P6.5 retina | AGATCCAGAA (2) GCCTCCCCTT (2) GGGGGAAACA (2)
| 15 | 0.015 |
| P10.5 crx- retina | AAGGAGATTA (2) GCCTCCCCTT (2) GGGGGAAACA (2)
| 22.4 | 0.0224 |
| P10.5 crx+ retina | AAGGAGATTA (2) GCCTCCCCTT (2) GGGGGAAACA (2) TAAAAATTCC
| 34.6 | 0.0346 |
| Adult retinal | GGGGGAAACA (2) TGAACAGTGG (2) TGAGCGTGTG (3)
| 13.1 | 0.0131 |
| ONL | AGATCCAGAA (2) GGGGGAAACA (2)
| 9.6 | 0.0096 |