Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29324	Ldh1	lactate dehydrogenase 1, A chain	7	7 23.5 cM	16828
Gene Ontology	glycolysis | L-lactate dehydrogenase activity | oxidoreductase activity
Human Homolog	LDHA[lactate dehydrogenase A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 279 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAACAAAA (2) CAAAATAAAA (3) CAATAAAACT CCAAATAAAA CCCATTTCCC GAGGATGCCC (2) GCAAAAACAA GCAAATAAAA (3) GCAGCCCTCC GCAGCCCTCT (2) GGCTTCTCTG (2) GTCAACGTAC GTGGAAATGG TATCCCTGGG (3) TCAGTGCACA TCTGCCTGCA TGGACTCCAG (2) TGGTGGACAG TGTTAAGATG (2) 101.1 0.1011 Cb medulloblastoma AAAAACAAAA (2) CAAAATAAAA (3) CCAAATAAAA GACGTACACA (3) GCAAAAACAA GCAAATAAAA (3) GCAGCCCTCT (2) GCTTGTGCCA (2) GTCAACGTAC TCAGTGCACA TCTGCCTGCA TGCCTGTGTG TGTTAAGATG (2) 110.8 0.1108 P8 GC+1d culture AAAAACAAAA (2) ATGCATATCT CAAAATAAAA (3) CAATAAAACT CAGTTCTTGG CCAAATAAAA CCCATTTCCC GAGGATGCCC (2) GAGGATGGCT (3) GCAAAAACAA GCAAATAAAA (3) GCCCTGGGGC (2) GGGCCCAAGC (3) GTCAACGTAC TCAGTGCACA TCTGCCTGCA TGTTAAGATG (2) 94.6 0.0946 P8 GC+SHH+1d culture AAAAACAAAA (2) CAAAATAAAA (3) CCAAATAAAA CCAATAAAAC (2) CCCATTTCCC GAGGATGGCT (3) GCAAAAACAA GCAAATAAAA (3) GCAGCCCTCC GCCCTGGGGC (2) GTCAACGTAC GTGGAAATGG TCAGTGCACA TCTGCCTGCA TGTGCCTGTG TGTTAAGATG (2) 111.5 0.1115 3T3 fibroblasts CAAAATAAAA (3) CCAAATAAAA GAGGATGCCC (2) GCAGCCCTCC GCCCTGGGGC (2) GCGACTCCAG GTCAACGTAC TCAGTGCACA 98 0.098 E15 cortex AAAAACAAAA (2) CCAAATAAAA GCCCTGGGGC (2) GTCAACGTAC TCAGTGCACA TGTTAAGATG (2) 59.2 0.0592 P1 cortex AAAAACAAAA (2) CCAAATAAAA GCAAAAACAA GCCCTGGGGC (2) GCTTGTGCCA (2) GTCAACGTAC TGCCTGTGTG TGGTGGACAG 49.7 0.0497 Hypothalamus AAAAACAAAA (2) CAATAAAACT CCAAATAAAA GACGTACACA (3) GCAAATAAAA (3) GCCCTGGGGC (2) TATCCCTGGG (3) TCAGTGCACA TCTGCCTGCA TGGACTCCAG (2) TGTTAAGATG (2) 50.6 0.0506 E12.5 retina AAAAACAAAA (2) CCAAATAAAA GACGTACACA (3) GCAAAAACAA GCAGCCTCTT (3) GCCCTGGGGC (2) GTCAACGTAC TCAGTGCACA TCTGCCTGCA TGTTAAGATG (2) 176.6 0.1766 E14.5 retina AAAAACAAAA (2) CAGTTCTTGG CCAAAATAAA (2) CCAAATAAAA CCCATTTCCC CCGCAGGCTC GCAGCCCTCT (2) GCAGCCTCTT (3) GCTTGTGCCA (2) GGAGCCTCTT GGAGGCTCTT GTCAACGTAC GTGGAAATGG TATCCTGGGA TCAGTGCACA TCTGCCTGCA TGTGCCTGTG TGTTAAGATG (2) TTTGGTGCAG 147.2 0.1472 E16.5 retina ATGCATATCT CCAAAATAAA (2) CCAAATAAAA CCGCAGGCTC GCAGCCCTCT (2) GCCCTGGGGC (2) GGAGCCTCTT GTGGAAATGG TATCCTGGGA TCAGTGCACA TCTGCCTGCA TGTTAAGATG (2) TTTGGTGCAG 231.8 0.2318 E18.5 retina AAAAACAAAA (2) ATGCATATCT CAAAATAAAA (3) CCAAATAAAA GCAAAAACAA GGCTTCTCTG (2) GTGGAAATGG TCAGTGCACA TGGACTCCAG (2) TGGTGGACAG TGTGCCTGTG TGTTAAGATG (2) 300 0.3 P0.5 retina AAAAACAAAA (2) ACTGTAAAGG CCAAATAAAA CCCATTTCCC GCAAAAACAA GCCCTGGGGC (2) GGGCCCAAGC (3) GTCAACGTAC TATCCCTGGG (3) TCAGTGCACA TCTGCCTGCA TGTTAAGATG (2) TTTGGTGCAG 106.4 0.1064 P2.5 retina AAAAACAAAA (2) ACTGTAAAGG CAAAATAAAA (3) CCAAAATAAA (2) CCAAATAAAA CCCATTTCCC CCGCAGGCTC GCAAAAACAA GCAAATAAAA (3) GCCCTGGGGC (2) GGAGGCTCTT GTCAACGTAC TCAGTGCACA TCTGCCTGCA TGTTAAGATG (2) TTTGGTGCAG 222.1 0.2221 P4.5 retina AAAAACAAAA (2) ATGCATATCT CAAAATAAAA (3) CAATAAAACT CAGTTCTTGG CCAAAATAAA (2) CCAAATAAAA GCAAATAAAA (3) GCAGCCTCTT (3) GCCCTGGGGC (2) GTCAACGTAC GTGGAAATGG TCAGTGCACA TCTGCCTGCA TGCCTGTGTG TGTTAAGATG (2) 297.3 0.2973 P6.5 retina ATGCATATCT CCAAAATAAA (2) CCAAATAAAA CCAATAAAAC (2) GAGGATGCCC (2) GCAAAAACAA GCAGCCTCTT (3) GCCCTGGGGC (2) GGAGGCTCTT GTCAACGTAC TCAGTGCACA TCTGCCTGCA TGCCTGTGTG TGTTAAGATG (2) TTTGGTGCAG 270.1 0.2701 P10.5 crx- retina AAAAACAAAA (2) ACTGTAAAGG ATGCATATCT CAAAATAAAA (3) CCAAATAAAA CCGCAGGCTC GCAAAAACAA GCAGCCTCTT (3) GCCCTGGGGC (2) GCGACTCCAG GGAGGCTCTT GTCAACGTAC GTGGAAATGG TATCCTGGGA TCAGTGCACA TCTGCCTGCA TGGTGGACAG TGTGCCTGTG TGTTAAGATG (2) TTTGGTGCAG 236.5 0.2365 P10.5 crx+ retina CAAAATAAAA (3) CCAAAATAAA (2) CCAAATAAAA GAGGATGCCC (2) GCAAAAACAA GCAGCCCTCT (2) GCCCTGGGGC (2) GCGACTCCCA TCAGTGCACA TCTGCCTGCA TGGTGGACAG TGTTAAGATG (2) TTTGGTGCAG 272.8 0.2728 Adult retinal AAAAACAAAA (2) ACTGTAAAGG ATGCATATCT CAAAATAAAA (3) CAATAAAACT CAGTTCTTGG CCAAATAAAA GAGGATGCCC (2) GCAAAAACAA GCAGCCCTCC GCAGCCCTCT (2) GCCCCGGGGA GCCCTGGGGC (2) GCGACTCCAG GTCAACGTAC GTGGAAATGG TCAGTGCACA TCTGCCTGCA TGCCTGTGTG TGGTGGACAG TGTTAAGATG (2) 154.3 0.1543 ONL AAAAACAAAA (2) ACTGTAAAGG ATGCATATCT CAAAATAAAA (3) CAATAAAACT CCAAATAAAA GAGGATGGCT (3) GCCCCGGGGA GCCCTGGGGC (2) GCGACTCCCA TCAGTGCACA TCTGCCTGCA TTTGGTGCAG 101.3 0.1013