Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29324	Ldh1	lactate dehydrogenase 1, A chain	7	7 23.5 cM	16828
Gene Ontology	glycolysis | L-lactate dehydrogenase activity | oxidoreductase activity
Human Homolog	LDHA[lactate dehydrogenase A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 279 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAATAAAA (2) 21.2 0.0212 P8 Cb GC TGTTAAGATG (6) 16.3 0.0163 P8 Cb GC GTCAACGTAC (3) 13.1 0.0131 P8 Cb GC TCAGTGCACA (2) 9.8 0.0098 P8 Cb GC CAATAAAACT (2) 6.5 0.0065 P8 Cb GC CAAAATAAAA (8) 4.9 0.0049 P8 Cb GC GCAAATAAAA (8) 3.3 0.0033 P8 Cb GC GTGGAAATGG (6) 3.3 0.0033 P8 Cb GC TATCCCTGGG (5) 3.3 0.0033 P8 Cb GC TCTGCCTGCA (8) 3.3 0.0033 P8 Cb GC TGGTGGACAG (4) 3.3 0.0033 P8 Cb GC AAAAACAAAA (12) 1.6 0.0016 P8 Cb GC CCCATTTCCC 1.6 0.0016 P8 Cb GC GAGGATGCCC (3) 1.6 0.0016 P8 Cb GC GCAAAAACAA (2) 1.6 0.0016 P8 Cb GC GCAGCCCTCC (2) 1.6 0.0016 P8 Cb GC GCAGCCCTCT (9) 1.6 0.0016 P8 Cb GC GGCTTCTCTG (7) 1.6 0.0016 P8 Cb GC TGGACTCCAG (3) 1.6 0.0016 Cb medulloblastoma AAAAACAAAA (12) 37 0.037 Cb medulloblastoma TCTGCCTGCA (8) 27.7 0.0277 Cb medulloblastoma CCAAATAAAA (2) 16.2 0.0162 Cb medulloblastoma CAAAATAAAA (8) 4.6 0.0046 Cb medulloblastoma GCAGCCCTCT (9) 4.6 0.0046 Cb medulloblastoma TCAGTGCACA (2) 4.6 0.0046 Cb medulloblastoma GACGTACACA (3) 2.3 0.0023 Cb medulloblastoma GCAAAAACAA (2) 2.3 0.0023 Cb medulloblastoma GCAAATAAAA (8) 2.3 0.0023 Cb medulloblastoma GCTTGTGCCA (3) 2.3 0.0023 Cb medulloblastoma GTCAACGTAC (3) 2.3 0.0023 Cb medulloblastoma TGCCTGTGTG (5) 2.3 0.0023 Cb medulloblastoma TGTTAAGATG (6) 2.3 0.0023 P8 GC+1d culture CCAAATAAAA (2) 27.4 0.0274 P8 GC+1d culture TCAGTGCACA (2) 12.6 0.0126 P8 GC+1d culture TGTTAAGATG (6) 11.4 0.0114 P8 GC+1d culture GCCCTGGGGC (7) 10.3 0.0103 P8 GC+1d culture AAAAACAAAA (12) 8 0.008 P8 GC+1d culture GTCAACGTAC (3) 4.6 0.0046 P8 GC+1d culture TCTGCCTGCA (8) 4.6 0.0046 P8 GC+1d culture CAATAAAACT (2) 3.4 0.0034 P8 GC+1d culture CAAAATAAAA (8) 2.3 0.0023 P8 GC+1d culture CCCATTTCCC 2.3 0.0023 P8 GC+1d culture ATGCATATCT 1.1 0.0011 P8 GC+1d culture CAGTTCTTGG (4) 1.1 0.0011 P8 GC+1d culture GAGGATGCCC (3) 1.1 0.0011 P8 GC+1d culture GAGGATGGCT (5) 1.1 0.0011 P8 GC+1d culture GCAAAAACAA (2) 1.1 0.0011 P8 GC+1d culture GCAAATAAAA (8) 1.1 0.0011 P8 GC+1d culture GGGCCCAAGC (13) 1.1 0.0011 P8 GC+SHH+1d culture CCAAATAAAA (2) 46.8 0.0468 P8 GC+SHH+1d culture AAAAACAAAA (12) 14.1 0.0141 P8 GC+SHH+1d culture TGTTAAGATG (6) 14.1 0.0141 P8 GC+SHH+1d culture TCAGTGCACA (2) 8.2 0.0082 P8 GC+SHH+1d culture TCTGCCTGCA (8) 8.2 0.0082 P8 GC+SHH+1d culture GTCAACGTAC (3) 7 0.007 P8 GC+SHH+1d culture GCAAATAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture CAAAATAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture CCAATAAAAC (4) 1.2 0.0012 P8 GC+SHH+1d culture CCCATTTCCC 1.2 0.0012 P8 GC+SHH+1d culture GAGGATGGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GCAAAAACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAGCCCTCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCCTGGGGC (7) 1.2 0.0012 P8 GC+SHH+1d culture GTGGAAATGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGTGCCTGTG (3) 1.2 0.0012 3T3 fibroblasts GCCCTGGGGC (7) 31.5 0.0315 3T3 fibroblasts GTCAACGTAC (3) 31.5 0.0315 3T3 fibroblasts CCAAATAAAA (2) 10.5 0.0105 3T3 fibroblasts TCAGTGCACA (2) 10.5 0.0105 3T3 fibroblasts CAAAATAAAA (8) 3.5 0.0035 3T3 fibroblasts GAGGATGCCC (3) 3.5 0.0035 3T3 fibroblasts GCAGCCCTCC (2) 3.5 0.0035 3T3 fibroblasts GCGACTCCAG (2) 3.5 0.0035 E15 cortex CCAAATAAAA (2) 29.7 0.0297 E15 cortex GTCAACGTAC (3) 9.9 0.0099 E15 cortex AAAAACAAAA (12) 4.9 0.0049 E15 cortex GCCCTGGGGC (7) 4.9 0.0049 E15 cortex TCAGTGCACA (2) 4.9 0.0049 E15 cortex TGTTAAGATG (6) 4.9 0.0049 P1 cortex CCAAATAAAA (2) 18.2 0.0182 P1 cortex AAAAACAAAA (12) 4.5 0.0045 P1 cortex GCAAAAACAA (2) 4.5 0.0045 P1 cortex GCCCTGGGGC (7) 4.5 0.0045 P1 cortex GCTTGTGCCA (3) 4.5 0.0045 P1 cortex GTCAACGTAC (3) 4.5 0.0045 P1 cortex TGCCTGTGTG (5) 4.5 0.0045 P1 cortex TGGTGGACAG (4) 4.5 0.0045 Hypothalamus CCAAATAAAA (2) 14.5 0.0145 Hypothalamus TCTGCCTGCA (8) 10.9 0.0109 Hypothalamus GCCCTGGGGC (7) 7.2 0.0072 Hypothalamus AAAAACAAAA (12) 3.6 0.0036 Hypothalamus TCAGTGCACA (2) 3.6 0.0036 Hypothalamus CAATAAAACT (2) 1.8 0.0018 Hypothalamus GACGTACACA (3) 1.8 0.0018 Hypothalamus GCAAATAAAA (8) 1.8 0.0018 Hypothalamus TATCCCTGGG (5) 1.8 0.0018 Hypothalamus TGGACTCCAG (3) 1.8 0.0018 Hypothalamus TGTTAAGATG (6) 1.8 0.0018 E12.5 retina CCAAATAAAA (2) 114.5 0.1145 E12.5 retina AAAAACAAAA (12) 13.1 0.0131 E12.5 retina GTCAACGTAC (3) 13.1 0.0131 E12.5 retina TCAGTGCACA (2) 11.3 0.0113 E12.5 retina TGTTAAGATG (6) 11.3 0.0113 E12.5 retina GACGTACACA (3) 3.8 0.0038 E12.5 retina GCCCTGGGGC (7) 3.8 0.0038 E12.5 retina GCAAAAACAA (2) 1.9 0.0019 E12.5 retina GCAGCCTCTT (11) 1.9 0.0019 E12.5 retina TCTGCCTGCA (8) 1.9 0.0019 E14.5 retina CCAAATAAAA (2) 67.4 0.0674 E14.5 retina TGTTAAGATG (6) 25.5 0.0255 E14.5 retina TTTGGTGCAG 9.1 0.0091 E14.5 retina TCTGCCTGCA (8) 7.3 0.0073 E14.5 retina AAAAACAAAA (12) 5.5 0.0055 E14.5 retina CCGCAGGCTC (2) 3.6 0.0036 E14.5 retina GGAGCCTCTT (2) 3.6 0.0036 E14.5 retina GTCAACGTAC (3) 3.6 0.0036 E14.5 retina GTGGAAATGG (6) 3.6 0.0036 E14.5 retina CAGTTCTTGG (4) 1.8 0.0018 E14.5 retina CCAAAATAAA (2) 1.8 0.0018 E14.5 retina CCCATTTCCC 1.8 0.0018 E14.5 retina GCAGCCCTCT (9) 1.8 0.0018 E14.5 retina GCAGCCTCTT (11) 1.8 0.0018 E14.5 retina GCTTGTGCCA (3) 1.8 0.0018 E14.5 retina GGAGGCTCTT (3) 1.8 0.0018 E14.5 retina TATCCTGGGA 1.8 0.0018 E14.5 retina TCAGTGCACA (2) 1.8 0.0018 E14.5 retina TGTGCCTGTG (3) 1.8 0.0018 E16.5 retina CCAAATAAAA (2) 157.6 0.1576 E16.5 retina TGTTAAGATG (6) 29 0.029 E16.5 retina GTGGAAATGG (6) 12.7 0.0127 E16.5 retina TTTGGTGCAG 9.1 0.0091 E16.5 retina TCAGTGCACA (2) 5.4 0.0054 E16.5 retina CCGCAGGCTC (2) 3.6 0.0036 E16.5 retina TCTGCCTGCA (8) 3.6 0.0036 E16.5 retina ATGCATATCT 1.8 0.0018 E16.5 retina CCAAAATAAA (2) 1.8 0.0018 E16.5 retina GCAGCCCTCT (9) 1.8 0.0018 E16.5 retina GCCCTGGGGC (7) 1.8 0.0018 E16.5 retina GGAGCCTCTT (2) 1.8 0.0018 E16.5 retina TATCCTGGGA 1.8 0.0018 E18.5 retina CCAAATAAAA (2) 245.6 0.2456 E18.5 retina TGTTAAGATG (6) 27.3 0.0273 E18.5 retina TCAGTGCACA (2) 5.5 0.0055 E18.5 retina AAAAACAAAA (12) 3.6 0.0036 E18.5 retina GTGGAAATGG (6) 3.6 0.0036 E18.5 retina TGGACTCCAG (3) 3.6 0.0036 E18.5 retina ATGCATATCT 1.8 0.0018 E18.5 retina CAAAATAAAA (8) 1.8 0.0018 E18.5 retina GCAAAAACAA (2) 1.8 0.0018 E18.5 retina GGCTTCTCTG (7) 1.8 0.0018 E18.5 retina TGGTGGACAG (4) 1.8 0.0018 E18.5 retina TGTGCCTGTG (3) 1.8 0.0018 P0.5 retina CCAAATAAAA (2) 39.3 0.0393 P0.5 retina TGTTAAGATG (6) 19.6 0.0196 P0.5 retina GTCAACGTAC (3) 9.8 0.0098 P0.5 retina GCCCTGGGGC (7) 7.9 0.0079 P0.5 retina GGGCCCAAGC (13) 7.9 0.0079 P0.5 retina TCAGTGCACA (2) 7.9 0.0079 P0.5 retina AAAAACAAAA (12) 2 0.002 P0.5 retina ACTGTAAAGG (2) 2 0.002 P0.5 retina CCCATTTCCC 2 0.002 P0.5 retina GCAAAAACAA (2) 2 0.002 P0.5 retina TATCCCTGGG (5) 2 0.002 P0.5 retina TCTGCCTGCA (8) 2 0.002 P0.5 retina TTTGGTGCAG 2 0.002 P2.5 retina CCAAATAAAA (2) 160.1 0.1601 P2.5 retina TCAGTGCACA (2) 17.6 0.0176 P2.5 retina TGTTAAGATG (6) 14.1 0.0141 P2.5 retina GTCAACGTAC (3) 5.3 0.0053 P2.5 retina AAAAACAAAA (12) 3.5 0.0035 P2.5 retina TTTGGTGCAG 3.5 0.0035 P2.5 retina ACTGTAAAGG (2) 1.8 0.0018 P2.5 retina CAAAATAAAA (8) 1.8 0.0018 P2.5 retina CCAAAATAAA (2) 1.8 0.0018 P2.5 retina CCCATTTCCC 1.8 0.0018 P2.5 retina CCGCAGGCTC (2) 1.8 0.0018 P2.5 retina GCAAAAACAA (2) 1.8 0.0018 P2.5 retina GCAAATAAAA (8) 1.8 0.0018 P2.5 retina GCCCTGGGGC (7) 1.8 0.0018 P2.5 retina GGAGGCTCTT (3) 1.8 0.0018 P2.5 retina TCTGCCTGCA (8) 1.8 0.0018 P4.5 retina CCAAATAAAA (2) 237.8 0.2378 P4.5 retina TCAGTGCACA (2) 7.9 0.0079 P4.5 retina CCAAAATAAA (2) 5.9 0.0059 P4.5 retina GCAAATAAAA (8) 5.9 0.0059 P4.5 retina TCTGCCTGCA (8) 5.9 0.0059 P4.5 retina TGTTAAGATG (6) 5.9 0.0059 P4.5 retina AAAAACAAAA (12) 4 0.004 P4.5 retina CAAAATAAAA (8) 4 0.004 P4.5 retina GTCAACGTAC (3) 4 0.004 P4.5 retina GTGGAAATGG (6) 4 0.004 P4.5 retina ATGCATATCT 2 0.002 P4.5 retina CAATAAAACT (2) 2 0.002 P4.5 retina CAGTTCTTGG (4) 2 0.002 P4.5 retina GCAGCCTCTT (11) 2 0.002 P4.5 retina GCCCTGGGGC (7) 2 0.002 P4.5 retina TGCCTGTGTG (5) 2 0.002 P6.5 retina CCAAATAAAA (2) 175.1 0.1751 P6.5 retina TCAGTGCACA (2) 31.7 0.0317 P6.5 retina TCTGCCTGCA (8) 15 0.015 P6.5 retina GCAAAAACAA (2) 8.3 0.0083 P6.5 retina TGTTAAGATG (6) 6.7 0.0067 P6.5 retina CCAATAAAAC (4) 5 0.005 P6.5 retina GTCAACGTAC (3) 5 0.005 P6.5 retina TTTGGTGCAG 5 0.005 P6.5 retina ATGCATATCT 3.3 0.0033 P6.5 retina GAGGATGCCC (3) 3.3 0.0033 P6.5 retina GCAGCCTCTT (11) 3.3 0.0033 P6.5 retina GGAGGCTCTT (3) 3.3 0.0033 P6.5 retina CCAAAATAAA (2) 1.7 0.0017 P6.5 retina GCCCTGGGGC (7) 1.7 0.0017 P6.5 retina TGCCTGTGTG (5) 1.7 0.0017 P10.5 crx- retina CCAAATAAAA (2) 144.9 0.1449 P10.5 crx- retina TGTTAAGATG (6) 18.6 0.0186 P10.5 crx- retina TTTGGTGCAG 18.6 0.0186 P10.5 crx- retina TCAGTGCACA (2) 16.7 0.0167 P10.5 crx- retina GCCCTGGGGC (7) 5.6 0.0056 P10.5 crx- retina GCAAAAACAA (2) 3.7 0.0037 P10.5 crx- retina GTGGAAATGG (6) 3.7 0.0037 P10.5 crx- retina AAAAACAAAA (12) 1.9 0.0019 P10.5 crx- retina ACTGTAAAGG (2) 1.9 0.0019 P10.5 crx- retina ATGCATATCT 1.9 0.0019 P10.5 crx- retina CAAAATAAAA (8) 1.9 0.0019 P10.5 crx- retina CCGCAGGCTC (2) 1.9 0.0019 P10.5 crx- retina GCAGCCTCTT (11) 1.9 0.0019 P10.5 crx- retina GCGACTCCAG (2) 1.9 0.0019 P10.5 crx- retina GGAGGCTCTT (3) 1.9 0.0019 P10.5 crx- retina GTCAACGTAC (3) 1.9 0.0019 P10.5 crx- retina TATCCTGGGA 1.9 0.0019 P10.5 crx- retina TCTGCCTGCA (8) 1.9 0.0019 P10.5 crx- retina TGGTGGACAG (4) 1.9 0.0019 P10.5 crx- retina TGTGCCTGTG (3) 1.9 0.0019 P10.5 crx+ retina CCAAATAAAA (2) 213.4 0.2134 P10.5 crx+ retina TCTGCCTGCA (8) 21.1 0.0211 P10.5 crx+ retina GCGACTCCCA 7.7 0.0077 P10.5 crx+ retina TCAGTGCACA (2) 7.7 0.0077 P10.5 crx+ retina GCAAAAACAA (2) 5.8 0.0058 P10.5 crx+ retina GCCCTGGGGC (7) 3.8 0.0038 P10.5 crx+ retina CAAAATAAAA (8) 1.9 0.0019 P10.5 crx+ retina CCAAAATAAA (2) 1.9 0.0019 P10.5 crx+ retina GAGGATGCCC (3) 1.9 0.0019 P10.5 crx+ retina GCAGCCCTCT (9) 1.9 0.0019 P10.5 crx+ retina TGGTGGACAG (4) 1.9 0.0019 P10.5 crx+ retina TGTTAAGATG (6) 1.9 0.0019 P10.5 crx+ retina TTTGGTGCAG 1.9 0.0019 Adult retinal CCAAATAAAA (2) 79.6 0.0796 Adult retinal TCTGCCTGCA (8) 11.1 0.0111 Adult retinal GCCCTGGGGC (7) 9.3 0.0093 Adult retinal GCAAAAACAA (2) 5.6 0.0056 Adult retinal GTCAACGTAC (3) 5.6 0.0056 Adult retinal TGCCTGTGTG (5) 5.6 0.0056 Adult retinal ACTGTAAAGG (2) 3.7 0.0037 Adult retinal CAATAAAACT (2) 3.7 0.0037 Adult retinal GCAGCCCTCT (9) 3.7 0.0037 Adult retinal GCGACTCCAG (2) 3.7 0.0037 Adult retinal GTGGAAATGG (6) 3.7 0.0037 Adult retinal AAAAACAAAA (12) 1.9 0.0019 Adult retinal ATGCATATCT 1.9 0.0019 Adult retinal CAAAATAAAA (8) 1.9 0.0019 Adult retinal CAGTTCTTGG (4) 1.9 0.0019 Adult retinal GAGGATGCCC (3) 1.9 0.0019 Adult retinal GCAGCCCTCC (2) 1.9 0.0019 Adult retinal GCCCCGGGGA (2) 1.9 0.0019 Adult retinal TCAGTGCACA (2) 1.9 0.0019 Adult retinal TGGTGGACAG (4) 1.9 0.0019 Adult retinal TGTTAAGATG (6) 1.9 0.0019 ONL CCAAATAAAA (2) 63.2 0.0632 ONL TCTGCCTGCA (8) 9.6 0.0096 ONL ACTGTAAAGG (2) 5.7 0.0057 ONL AAAAACAAAA (12) 3.8 0.0038 ONL TCAGTGCACA (2) 3.8 0.0038 ONL ATGCATATCT 1.9 0.0019 ONL CAAAATAAAA (8) 1.9 0.0019 ONL CAATAAAACT (2) 1.9 0.0019 ONL GAGGATGGCT (5) 1.9 0.0019 ONL GCCCCGGGGA (2) 1.9 0.0019 ONL GCCCTGGGGC (7) 1.9 0.0019 ONL GCGACTCCCA 1.9 0.0019 ONL TTTGGTGCAG 1.9 0.0019