Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293517	Sdf4	stromal cell derived factor 4	4		20318
Gene Ontology	calcium ion binding | extracellular space | Golgi apparatus
Human Homolog	Cab45[calcium binding protein Cab45 precursor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) TTTCTGGATA (2) 26 0.026 Cb medulloblastoma AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) GTCTGGCTGG (2) TGTCTGAGGC 50.8 0.0508 P8 GC+1d culture AGCTTGCTGC AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) TGTCTGAGGC TTTCTGGATA (2) 41 0.041 P8 GC+SHH+1d culture AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GAGTCCTTGG (3) GCCCAGGTTT (2) 32.8 0.0328 3T3 fibroblasts ATGGTGGTTC (2) CCTGTCTACT 24.5 0.0245 E15 cortex AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) GTCTGGCTGG (2) 39.4 0.0394 P1 cortex CCTGTCTACT GCCCAGGTTT (2) 13.6 0.0136 Hypothalamus ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) GTCTGGCTGG (2) 23.5 0.0235 E12.5 retina AGGGCCAGGA (2) CCTGTCTACT GCCCAGGTTT (2) GGGAAGGGCA 18.8 0.0188 E14.5 retina AGCTTGCTGC CCTGTCTACT GAGTCCTTGG (3) GCCCAGGTTT (2) 20 0.02 E16.5 retina AGGGCCAGGA (2) CCTGTCTACT GAGTCCTTGG (3) GCCCAGGTTT (2) 25.3 0.0253 E18.5 retina CCTGTCTACT GCCCAGGTTT (2) GGGAAGGGCA TTTTCTGAGA (3) 25.4 0.0254 P0.5 retina AGGGCCAGGA (2) CCTGTCTACT GAGTCCTTGG (3) GCCCAGGTTT (2) TTTCTGGATA (2) 25.6 0.0256 P2.5 retina AGGGCCAGGA (2) GCCCAGGTTT (2) TTTCTGGATA (2) TTTTCTGAGA (3) 36.9 0.0369 P4.5 retina AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) 27.8 0.0278 P6.5 retina AGGGCCAGGA (2) ATGGTGGTTC (2) GCCCAGGTTT (2) TTTTCTGAGA (3) 26.7 0.0267 P10.5 crx- retina AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) TTTCTGGATA (2) 37.1 0.0371 P10.5 crx+ retina AGCTTGCTGC ATGGTGGTTC (2) CCTGTCTACT GAGAAGAGCA GCCCAGGTTT (2) TGTCTGAGGC 30.7 0.0307 Adult retinal AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GAGAAGAGCA GCCCAGGTTT (2) GGGAAGGGCA GTCTGGCTGG (2) 52.1 0.0521 ONL AGGGCCAGGA (2) ATGGTGGTTC (2) CCTGTCTACT GCCCAGGTTT (2) 40.2 0.0402