Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2945	Capzb	capping protein (actin filament) muscle Z-line, beta	4	4 66.8 cM	12345
Gene Ontology	actin binding | actin cytoskeleton organization and biogenesis | cytoskeleton | F-actin capping protein complex
Human Homolog	CAPZB[capping protein (actin filament) muscle Z-line, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCTGGGAG (2) CAAGGGCTCT CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCCTGCTGG (4) GCGTGTCCGG TACATTTTTT (2) TATTTTGAAG 34.1 0.0341 Cb medulloblastoma AACCTGGGAG (2) CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCAAAACAAA (2) GGAAAACAAA TAAACAAAAA TACATTTTTT (2) 39.3 0.0393 P8 GC+1d culture AACCCGGGAG (2) AACCTGGGAG (2) CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCCTGCTGG (4) GGAAAACAAA GTGTAAAAAT TAAACAAAAA TGGGGGTGGG (2) 44.4 0.0444 P8 GC+SHH+1d culture AACCCGGGAG (2) CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCCTGCTGG (4) GGAAAACAAA TACATTTTTT (2) TATTTTGAAG 45.7 0.0457 3T3 fibroblasts CACTCGTTAG CTGGGGTGGG (2) TCCTCCACCA 63.1 0.0631 E15 cortex AACCTGGGAG (2) CACTCGTTAG CTGGGGTGGG (2) GCCGCCTCCG (2) 34.5 0.0345 P1 cortex CTGGGGTGGG (2) 9.1 0.0091 Hypothalamus CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCGTGTCCGG GGAAAACAAA TATTTTGAAG 36.2 0.0362 E12.5 retina CACTCGTTAG CTGGGGTGGG (2) GCAAAACAAA (2) GTGTAAAAAT 33.8 0.0338 E14.5 retina CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCGCCTCCG (2) GGAAAACAAA 21.8 0.0218 E16.5 retina CAAGGGCTCT CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCAAAACCAA (3) TATTTTGAAG TCCTCCACCA 27 0.027 E18.5 retina AACCTGGGAG (2) CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GGAAAACAAA 21.8 0.0218 P0.5 retina CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCAAAACAAA (2) GTGTAAAAAT TATTTTGAAG 27.6 0.0276 P2.5 retina CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCCTGCTGG (4) 38.8 0.0388 P4.5 retina CAAGGGCTCT CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCCTGCTGG (4) GGAAAACAAA TACATTTTTT (2) TATTTTGAAG 39.7 0.0397 P6.5 retina CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GGAAAACAAA 31.7 0.0317 P10.5 crx- retina CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCCCTGCTGG (4) GCGTGTCCGG TATTTTGAAG TCCTCCACCA 22.5 0.0225 P10.5 crx+ retina CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GGAAAACAAA GTGTAAAAAT TGGGGGTGGG (2) 42.2 0.0422 Adult retinal CACTCGTTAG CTGGGGTGGG (2) GCAAAACCAA (3) GCCGCCTCCG (2) GGAAAACAAA GTGTAAAAAT TGGGGGTGGG (2) 24.3 0.0243 ONL AACCTGGGAG (2) CACTCGTTAG CTGGGGTGGG (2) GAAAACAAAA GCAAAACCAA (3) GCCCTGCTGG (4) GGAAAACAAA GTGTAAAAAT TAAACAAAAA 42 0.042