Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2945	Capzb	capping protein (actin filament) muscle Z-line, beta	4	4 66.8 cM	12345
Gene Ontology	actin binding | actin cytoskeleton organization and biogenesis | cytoskeleton | F-actin capping protein complex
Human Homolog	CAPZB[capping protein (actin filament) muscle Z-line, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGGGTGGG (2) 11.4 0.0114 P8 Cb GC GAAAACAAAA (8) 9.8 0.0098 P8 Cb GC CACTCGTTAG 3.3 0.0033 P8 Cb GC AACCTGGGAG (4) 1.6 0.0016 P8 Cb GC CAAGGGCTCT (2) 1.6 0.0016 P8 Cb GC GCCCTGCTGG (12) 1.6 0.0016 P8 Cb GC GCGTGTCCGG 1.6 0.0016 P8 Cb GC TACATTTTTT (4) 1.6 0.0016 P8 Cb GC TATTTTGAAG (2) 1.6 0.0016 Cb medulloblastoma CTGGGGTGGG (2) 11.6 0.0116 Cb medulloblastoma GAAAACAAAA (8) 11.6 0.0116 Cb medulloblastoma TAAACAAAAA (3) 4.6 0.0046 Cb medulloblastoma AACCTGGGAG (4) 2.3 0.0023 Cb medulloblastoma CACTCGTTAG 2.3 0.0023 Cb medulloblastoma GCAAAACAAA (6) 2.3 0.0023 Cb medulloblastoma GGAAAACAAA (5) 2.3 0.0023 Cb medulloblastoma TACATTTTTT (4) 2.3 0.0023 P8 GC+1d culture CTGGGGTGGG (2) 21.7 0.0217 P8 GC+1d culture GAAAACAAAA (8) 5.7 0.0057 P8 GC+1d culture CACTCGTTAG 4.6 0.0046 P8 GC+1d culture GTGTAAAAAT (2) 3.4 0.0034 P8 GC+1d culture GCCCTGCTGG (12) 2.3 0.0023 P8 GC+1d culture GGAAAACAAA (5) 2.3 0.0023 P8 GC+1d culture AACCCGGGAG (3) 1.1 0.0011 P8 GC+1d culture AACCTGGGAG (4) 1.1 0.0011 P8 GC+1d culture TAAACAAAAA (3) 1.1 0.0011 P8 GC+1d culture TGGGGGTGGG (4) 1.1 0.0011 P8 GC+SHH+1d culture CTGGGGTGGG (2) 17.6 0.0176 P8 GC+SHH+1d culture CACTCGTTAG 9.4 0.0094 P8 GC+SHH+1d culture GAAAACAAAA (8) 7 0.007 P8 GC+SHH+1d culture AACCCGGGAG (3) 3.5 0.0035 P8 GC+SHH+1d culture GCCCTGCTGG (12) 3.5 0.0035 P8 GC+SHH+1d culture TACATTTTTT (4) 2.3 0.0023 P8 GC+SHH+1d culture GGAAAACAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTGAAG (2) 1.2 0.0012 3T3 fibroblasts CTGGGGTGGG (2) 49.1 0.0491 3T3 fibroblasts CACTCGTTAG 10.5 0.0105 3T3 fibroblasts TCCTCCACCA (8) 3.5 0.0035 E15 cortex CTGGGGTGGG (2) 14.8 0.0148 E15 cortex CACTCGTTAG 9.9 0.0099 E15 cortex AACCTGGGAG (4) 4.9 0.0049 E15 cortex GCCGCCTCCG (5) 4.9 0.0049 P1 cortex CTGGGGTGGG (2) 9.1 0.0091 Hypothalamus CTGGGGTGGG (2) 18.1 0.0181 Hypothalamus GAAAACAAAA (8) 9.1 0.0091 Hypothalamus GGAAAACAAA (5) 3.6 0.0036 Hypothalamus CACTCGTTAG 1.8 0.0018 Hypothalamus GCGTGTCCGG 1.8 0.0018 Hypothalamus TATTTTGAAG (2) 1.8 0.0018 E12.5 retina CTGGGGTGGG (2) 24.4 0.0244 E12.5 retina CACTCGTTAG 5.6 0.0056 E12.5 retina GCAAAACAAA (6) 1.9 0.0019 E12.5 retina GTGTAAAAAT (2) 1.9 0.0019 E14.5 retina GAAAACAAAA (8) 9.1 0.0091 E14.5 retina CTGGGGTGGG (2) 5.5 0.0055 E14.5 retina CACTCGTTAG 3.6 0.0036 E14.5 retina GCCGCCTCCG (5) 1.8 0.0018 E14.5 retina GGAAAACAAA (5) 1.8 0.0018 E16.5 retina CACTCGTTAG 7.2 0.0072 E16.5 retina CTGGGGTGGG (2) 7.2 0.0072 E16.5 retina TATTTTGAAG (2) 3.6 0.0036 E16.5 retina TCCTCCACCA (8) 3.6 0.0036 E16.5 retina CAAGGGCTCT (2) 1.8 0.0018 E16.5 retina GAAAACAAAA (8) 1.8 0.0018 E16.5 retina GCAAAACCAA (7) 1.8 0.0018 E18.5 retina GAAAACAAAA (8) 10.9 0.0109 E18.5 retina CTGGGGTGGG (2) 5.5 0.0055 E18.5 retina AACCTGGGAG (4) 1.8 0.0018 E18.5 retina CACTCGTTAG 1.8 0.0018 E18.5 retina GGAAAACAAA (5) 1.8 0.0018 P0.5 retina CTGGGGTGGG (2) 7.9 0.0079 P0.5 retina CACTCGTTAG 5.9 0.0059 P0.5 retina GAAAACAAAA (8) 5.9 0.0059 P0.5 retina TATTTTGAAG (2) 3.9 0.0039 P0.5 retina GCAAAACAAA (6) 2 0.002 P0.5 retina GTGTAAAAAT (2) 2 0.002 P2.5 retina CTGGGGTGGG (2) 17.6 0.0176 P2.5 retina GAAAACAAAA (8) 17.6 0.0176 P2.5 retina CACTCGTTAG 1.8 0.0018 P2.5 retina GCCCTGCTGG (12) 1.8 0.0018 P4.5 retina CTGGGGTGGG (2) 11.9 0.0119 P4.5 retina GAAAACAAAA (8) 11.9 0.0119 P4.5 retina GCCCTGCTGG (12) 5.9 0.0059 P4.5 retina CAAGGGCTCT (2) 2 0.002 P4.5 retina CACTCGTTAG 2 0.002 P4.5 retina GGAAAACAAA (5) 2 0.002 P4.5 retina TACATTTTTT (4) 2 0.002 P4.5 retina TATTTTGAAG (2) 2 0.002 P6.5 retina CTGGGGTGGG (2) 20 0.02 P6.5 retina CACTCGTTAG 5 0.005 P6.5 retina GAAAACAAAA (8) 5 0.005 P6.5 retina GGAAAACAAA (5) 1.7 0.0017 P10.5 crx- retina CTGGGGTGGG (2) 9.3 0.0093 P10.5 crx- retina GAAAACAAAA (8) 3.7 0.0037 P10.5 crx- retina CACTCGTTAG 1.9 0.0019 P10.5 crx- retina GCCCTGCTGG (12) 1.9 0.0019 P10.5 crx- retina GCGTGTCCGG 1.9 0.0019 P10.5 crx- retina TATTTTGAAG (2) 1.9 0.0019 P10.5 crx- retina TCCTCCACCA (8) 1.9 0.0019 P10.5 crx+ retina CTGGGGTGGG (2) 21.1 0.0211 P10.5 crx+ retina GAAAACAAAA (8) 7.7 0.0077 P10.5 crx+ retina GTGTAAAAAT (2) 5.8 0.0058 P10.5 crx+ retina CACTCGTTAG 3.8 0.0038 P10.5 crx+ retina GGAAAACAAA (5) 1.9 0.0019 P10.5 crx+ retina TGGGGGTGGG (4) 1.9 0.0019 Adult retinal CACTCGTTAG 7.4 0.0074 Adult retinal CTGGGGTGGG (2) 7.4 0.0074 Adult retinal GCAAAACCAA (7) 1.9 0.0019 Adult retinal GCCGCCTCCG (5) 1.9 0.0019 Adult retinal GGAAAACAAA (5) 1.9 0.0019 Adult retinal GTGTAAAAAT (2) 1.9 0.0019 Adult retinal TGGGGGTGGG (4) 1.9 0.0019 ONL GTGTAAAAAT (2) 11.5 0.0115 ONL CTGGGGTGGG (2) 9.6 0.0096 ONL CACTCGTTAG 5.7 0.0057 ONL GCCCTGCTGG (12) 3.8 0.0038 ONL GGAAAACAAA (5) 3.8 0.0038 ONL AACCTGGGAG (4) 1.9 0.0019 ONL GAAAACAAAA (8) 1.9 0.0019 ONL GCAAAACCAA (7) 1.9 0.0019 ONL TAAACAAAAA (3) 1.9 0.0019