Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29564	Mmp2	matrix metalloproteinase 2	8	8 44.0 cM	17390
Gene Ontology	calcium ion binding | collagen catabolism | extracellular matrix | extracellular space | gelatinase A activity | hydrolase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP2[matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGGCCTTT GGAAATGGCA GGATGGGGAG (2) GGGAATGGCA (2) 66.8 0.0668 Cb medulloblastoma CTGCACCATC GGAAATGGCA GGATGGGGAG (2) 46.2 0.0462 P8 GC+1d culture CCTTTGCCCC (2) CTGCACCATC GGAAATGGCA GGATGGGGAG (2) 60.5 0.0605 P8 GC+SHH+1d culture CCTTTGCCCC (2) CTGCACCATC GGAAATGGCA GGATGGGGAG (2) 46.9 0.0469 3T3 fibroblasts CTGCACCATC GGAAATGGCA GGATGGGGAG (2) 49 0.049 E15 cortex CCTGGCCTTT CCTTTGCCCC (2) GGATGGGGAG (2) GGGAATGGCA (2) 29.5 0.0295 P1 cortex CCTTTGCCCC (2) GGATGGGGAG (2) 22.7 0.0227 Hypothalamus GGATGGGGAG (2) 38 0.038 E12.5 retina CTGCACCATC GGATGGGGAG (2) 107 0.107 E14.5 retina CCTGGCCTTT CCTTTGCCCC (2) GGATGGGGAG (2) 29.1 0.0291 E16.5 retina GGAAATGGCA GGATGGGGAG (2) 39.8 0.0398 E18.5 retina GGATGGGGAG (2) 54.6 0.0546 P0.5 retina GGAAATGGCA GGATGGGGAG (2) 64.7 0.0647 P2.5 retina GGATGGGGAG (2) 89.7 0.0897 P4.5 retina GGATGGGGAG (2) 57.5 0.0575 P6.5 retina CCTTTGCCCC (2) GGAAATGGCA GGATGGGGAG (2) 81.7 0.0817 P10.5 crx- retina GGAAATGGCA GGATGGGGAG (2) 18.6 0.0186 P10.5 crx+ retina CTGCACCATC GGAAATGGCA GGATGGGGAG (2) 78.8 0.0788 Adult retinal CCTGGCCTTT CCTTTGCCCC (2) GGAAATGGCA GGATGGGGAG (2) 27.9 0.0279 ONL CCTGGCCTTT GGATGGGGAG (2) GGGAATGGCA (2) 42.1 0.0421