| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGTATGTGTG (3)
| 1.6 | 0.0016 |
| P8 GC+1d culture | TGGTTGGACA (2) TGTATGTGTG (3) TTGTTAATAA (2)
| 9 | 0.009 |
| P8 GC+SHH+1d culture | GGCAGCTGGC (2) TGGTTGGACA (2) TTGTTAATAA (2)
| 11.7 | 0.0117 |
| 3T3 fibroblasts | TGGTTGGACA (2)
| 3.5 | 0.0035 |
| E15 cortex | TGGTTGGACA (2)
| 4.9 | 0.0049 |
| P1 cortex | TGGTTGGACA (2) TGTATGTGTG (3)
| 9 | 0.009 |
| Hypothalamus | GGCAGCTGGC (2) TTGTTAATAA (2)
| 9 | 0.009 |
| E12.5 retina | GGCAGGTGGG (2) TGGTTGGACA (2) TTGTTAATAA (2)
| 5.7 | 0.0057 |
| E14.5 retina | TGGTTGGACA (2) TGTATGTGTG (3) TTGTTAATAA (2)
| 14.5 | 0.0145 |
| E16.5 retina | GGCAGGTGGG (2) TGGTTGGACA (2) TGTATGTGTG (3) TTGTTAATAA (2)
| 12.6 | 0.0126 |
| E18.5 retina | GGCAGGTGGG (2) TGGTTGGACA (2) TGTATGTGTG (3)
| 5.4 | 0.0054 |
| P0.5 retina | TGGTTGGACA (2)
| 3.9 | 0.0039 |
| P2.5 retina | GGCAGGTGGG (2) TGGTTGGACA (2) TTGTTAATAA (2)
| 8.8 | 0.0088 |
| P4.5 retina | TGGTTGGACA (2) TTGTTAATAA (2)
| 11.9 | 0.0119 |
| P6.5 retina | TTGTTAATAA (2)
| 3.3 | 0.0033 |
| P10.5 crx- retina | TTGTTAATAA (2)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GGCAGCTGGC (2) GGCAGGTGGG (2) TGGTTGGACA (2) TTGTTAATAA (2)
| 11.4 | 0.0114 |
| Adult retinal | TGGTTGGACA (2) TGTATGTGTG (3)
| 3.8 | 0.0038 |
| ONL | TGGTTGGACA (2) TGTATGTGTG (3) TTGTTAATAA (2)
| 7.6 | 0.0076 |