Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296303	Csnk	casein kappa	5	5 45.2 cM	12994
Gene Ontology	extracellular | extracellular space
Human Homolog	CSN3[casein kappa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGCCACAG CAAAAAAAAA (2) GCACAAAAAA GTGGGAACTG (2) TGGTTGCTGG 124 0.124 Cb medulloblastoma CAAAAAAAAA (2) CATTTCACAG GTGGGAACTG (2) TGGTTGCTGG 215 0.215 P8 GC+1d culture AAGGTCTGGG (2) AATGCCACAG CAAAAAAAAA (2) CCAATAAAAA (3) CCACAAAACA CCCAATCCTG (3) GCACAAAAAA GTGGGAACTG (2) TGGTTGCTGG 108.4 0.1084 P8 GC+SHH+1d culture CAAAAAAAAA (2) GAAAAGACAA (3) GTGGGAACTG (2) TGGTTGCTGG 152.1 0.1521 3T3 fibroblasts AATGCCACAG GAAAAGACAA (3) TGGTTGCTGG 227.8 0.2278 E15 cortex CAAAAAAAAA (2) TGGTTGCTGG 311.7 0.3117 P1 cortex CAAAAAAAAA (2) TGGTTGCTGG 109.1 0.1091 Hypothalamus AATGCCACAG AATGCCCACA CAAAAAAAAA (2) CATTTCACAG GTGGGAACTG (2) TGGTTGCTGG 400.2 0.4002 E12.5 retina CAAAAAAAAA (2) GAAAAGACAA (3) GTGGGAACTG (2) TGGTTGCTGG 184 0.184 E14.5 retina AATGCCCACA CAAAAAAAAA (2) GCACAAAAAA TGGTTGCTGG 949.2 0.9492 E16.5 retina AAGGTCTGGG (2) AATGCCACAG CAAAAAAAAA (2) GTGGGAACTG (2) TGGTTGCTGG 789.6 0.7896 E18.5 retina CAAAAAAAAA (2) CCAATAAAAA (3) GTGGGAACTG (2) TGGTTGCTGG 305.5 0.3055 P0.5 retina AAGGTCTGGG (2) AATGCCACAG ACAATGCAGA (2) CAAAAAAAAA (2) CCACAAAACA GAAAAGACAA (3) GCACAAAAAA TGGTTGCTGG 341.7 0.3417 P2.5 retina AAGGTCTGGG (2) ACAATGCAGA (2) CAAAAAAAAA (2) CCCAATCCTG (3) GAAAAGACAA (3) GTGGGAACTG (2) TGGTTGCTGG 228.9 0.2289 P4.5 retina AATGCCCACA ACAATGCAGA (2) CAAAAAAAAA (2) CCACAAAACA GAAAAGACAA (3) TGGTTGCTGG 208 0.208 P6.5 retina CAAAAAAAAA (2) CCAATAAAAA (3) CCCAATCCTG (3) GCACAAAAAA GTGGGAACTG (2) TGGTTGCTGG 198.5 0.1985 P10.5 crx- retina AATGCCACAG ACAATGCAGA (2) CAAAAAAAAA (2) CATTTCACAG GCACAAAAAA GTGGGAACTG (2) TGGTTGCTGG 327 0.327 P10.5 crx+ retina AATGCCACAG CAAAAAAAAA (2) CCCAATCCTG (3) GTGGGAACTG (2) TGGTTGCTGG 150 0.15 Adult retinal AATGCCACAG CAAAAAAAAA (2) CCCAATCCTG (3) TGGTTGCTGG 242.6 0.2426 ONL AATGCCACAG ATCCACAGGG (3) CAAAAAAAAA (2) GCACAAAAAA GTGGGAACTG (2) TGGTTGCTGG 467.3 0.4673