Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296338	Psma3	proteasome (prosome, macropain) subunit, alpha type 3	12		19167
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | protein binding | ubiquitin-dependent protein catabolism
Human Homolog	PSMA3[proteasome (prosome, macropain) subunit, alpha type, 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATTGCTT (2) CCTTTAATCC (3) GACTATATAT GTGCTAGCCA TTGGGGTCTT 76.7 0.0767 Cb medulloblastoma AAAATTGCTT (2) AAATTTGTTC AGTTCAAATC CCTTTAATCC (3) GACTATATAT GACTATTTTT (3) 64.6 0.0646 P8 GC+1d culture AAAATTGCTT (2) AAATTGTTCC AGTTCAAATC CCTTTAATCC (3) GACTATATAT GTGCTAGCCA TATGTCCACG (2) 61.6 0.0616 P8 GC+SHH+1d culture AAAATTGCTT (2) AAATTGTTCC AAATTTGTTC AATGTTCCCA AGTTCAAATC CCTTTAATCC (3) GACTATATAT GACTATTTTT (3) TCTTCCTTTA 64.6 0.0646 3T3 fibroblasts CCTTTAATCC (3) GTCATAGCTG (2) TATGTCCACG (2) 84.1 0.0841 E15 cortex AAAATTGCTT (2) CCTTTAATCC (3) GTCATAGCTG (2) 64.2 0.0642 P1 cortex AAAATTGCTT (2) AAATTTGTTC CCTTTAATCC (3) TATGTCCACG (2) TTGGGGTCTT 172.5 0.1725 Hypothalamus AAAATTGCTT (2) AAATTTGTTC CCTTTAATCC (3) GACTATATAT GTGCTAGCCA TATGTCCACG (2) 61.5 0.0615 E12.5 retina AAAATTGCTT (2) AAATTTGTTC AGTTCAAATC CCTTTAATCC (3) GACTATATAT TTGAAATGGC 112.6 0.1126 E14.5 retina AAAATTGCTT (2) AAATTGTTCC AAATTTGTTC CCTTTAATCC (3) GACTATATAT GTGCTAGCCA TCTTCCTTTA 156.6 0.1566 E16.5 retina AAAATTGCTT (2) AAATTGTTCC AAATTTGTTC CCTTTAATCC (3) GACTATATAT TCTTCCTTTA TTGAAATGGC 110.3 0.1103 E18.5 retina AAAATTGCTT (2) CCTTTAATCC (3) GACTATATAT GTGCTAGCCA TTGAAATGGC 81.9 0.0819 P0.5 retina AAATTTGTTC CCTTTAATCC (3) GACTATATAT GACTATTTTT (3) GTCATAGCTG (2) TATGTCCACG (2) 92.1 0.0921 P2.5 retina AAAATTGCTT (2) AAATTTGTTC AATGTTCCCA CCTTTAATCC (3) GACTATATAT GTCATAGCTG (2) GTGCTAGCCA TTGAAATGGC 107.4 0.1074 P4.5 retina AAAATTGCTT (2) AAATTTGTTC AATGTTCCCA CCTTTAATCC (3) GACTATATAT GTCATAGCTG (2) 79.2 0.0792 P6.5 retina AAAATTGCTT (2) AAATTTGTTC CCTTTAATCC (3) GACTATATAT GTCATAGCTG (2) TATGTCCACG (2) 101.6 0.1016 P10.5 crx- retina AAAATTGCTT (2) AAATTGTTCC AAATTTGTTC AGTTCAAATC CCTTTAATCC (3) GACTATATAT TATGTCCACG (2) 85.6 0.0856 P10.5 crx+ retina AAAATTGCTT (2) AAATTTGTTC AGTTCAAATC CCTTTAATCC (3) GACTATATAT TATGTCCACG (2) TCTTCCTTTA 71 0.071 Adult retinal AATGTTCCCA CCTTTAATCC (3) GACTATATAT GTCATAGCTG (2) 139 0.139 ONL AAAATTGCTT (2) AAATTTGTTC AATGTTCCCA CCTTTAATCC (3) GACTATATAT GTCATAGCTG (2) 101.4 0.1014