Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29870	Itm2c	integral membrane protein 2C	1		64294
Gene Ontology	ATP binding | biological_process unknown | integral to membrane | membrane fraction
Human Homolog	ITM2C[integral membrane protein 2C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGCTCACA (2) GTAGTGGAGC (2) 42.5 0.0425 Cb medulloblastoma AAGGCTCACA (2) CAGGAAAAAA (2) GAGCACCCAA GTAGTGGAGC (2) 134.1 0.1341 P8 GC+1d culture AAGGCTCACA (2) AGGCTCACAA GAGCACCCAA GGTTCTATCC GTAGTGGAGC (2) 51.3 0.0513 P8 GC+SHH+1d culture AAGGCTCACA (2) AGGCTCACAA AGTAAAAATA CAGGAAAAAA (2) GTAGTGGAGC (2) 28.1 0.0281 3T3 fibroblasts AAGGCTCACA (2) GTAGTGGAGC (2) 24.5 0.0245 E15 cortex AAGGCTCACA (2) 14.8 0.0148 P1 cortex AAGGCTCACA (2) AGGCTCACAA GGGGGGGGAA 13.5 0.0135 Hypothalamus AAGGCTCACA (2) AGGCTCACAA CAGGAAAAAA (2) GAGCACCCAA GGTTCTATCC GTAGTGGAGC (2) 130.4 0.1304 E12.5 retina AAGGCTCACA (2) GTAGTGGAGC (2) 11.2 0.0112 E14.5 retina AAGGCTCACA (2) CAGGAAAAAA (2) GTAGTGGAGC (2) 45.6 0.0456 E16.5 retina AAGGCTCACA (2) GAGCACCCAA GTAGTGGAGC (2) 29 0.029 E18.5 retina AAGGCTCACA (2) CAGGAAAAAA (2) GTAGTGGAGC (2) 23.7 0.0237 P0.5 retina AAGGCTCACA (2) GAGCACCCAA GGGGGGGGAA GTAGTGGAGC (2) 15.8 0.0158 P2.5 retina AAGGCTCACA (2) AGTAAAAATA CAGGAAAAAA (2) GGGGGGGGAA GTAGTGGAGC (2) 37.1 0.0371 P4.5 retina AAGGCTCACA (2) AGTAAAAATA GAGCACCCAA GTAGTGGAGC (2) 15.9 0.0159 P6.5 retina AAGGCTCACA (2) CAGGAAAAAA (2) GAGCACCCAA GTAGTGGAGC (2) 55 0.055 P10.5 crx- retina AAGGCTCACA (2) GTAGTGGAGC (2) 120.8 0.1208 P10.5 crx+ retina AAGGCTCACA (2) GAGCACCCAA GGTTCTATCC GTAGTGGAGC (2) 103.8 0.1038 Adult retinal AAGGCTCACA (2) CAGGAAAAAA (2) GAGCACCCAA GGGGGGGGAA GTAGTGGAGC (2) 59.4 0.0594 ONL AAGGCTCACA (2) AGTAAAAATA GTAGTGGAGC (2) 24.8 0.0248