Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2999	Smc2l1	SMC2 structural maintenance of chromosomes 2-like 1 (yeast)	4	4 18.5 cM	14211
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | cell cycle | chromosome segregation | membrane | mitosis | mitotic chromosome condensation | nucleus | transport
Human Homolog	SMC2L1[SMC2 structural maintenance of chromosomes 2-like 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TAGCCTATAG (2) TCTCACAGAA TTAAAAAAAA (2) 60.4 0.0604 Cb medulloblastoma CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 201.2 0.2012 P8 GC+1d culture CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) TTTCGTCCTG 98.1 0.0981 P8 GC+SHH+1d culture ATAAAGAAAA (2) CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) TTTCGTCCTG TTTTTGCTTT 139.4 0.1394 E15 cortex CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 34.5 0.0345 P1 cortex CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 63.5 0.0635 Hypothalamus CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 88.7 0.0887 E12.5 retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 48.9 0.0489 E14.5 retina ATAAAGAAAA (2) CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TCTCACAGAA TTAAAAAAAA (2) 58.3 0.0583 E16.5 retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TCTCACAGAA TTAAAAAAAA (2) TTTTTGCTTT 48.8 0.0488 E18.5 retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 134.6 0.1346 P0.5 retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TCTCACAGAA TTAAAAAAAA (2) 60.9 0.0609 P2.5 retina ATAAAGAAAA (2) CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TCTCACAGAA TTAAAAAAAA (2) 128.4 0.1284 P4.5 retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 124.8 0.1248 P6.5 retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TCTCACAGAA TTAAAAAAAA (2) 85 0.085 P10.5 crx- retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) TTTCGTCCTG 42.8 0.0428 P10.5 crx+ retina CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TTAAAAAAAA (2) 57.7 0.0577 Adult retinal ATAAAGAAAA (2) CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TAGCCTATAG (2) TTAAAAAAAA (2) 61.2 0.0612 ONL CCAAAAAAAA (3) CTAAAAAAAA (2) CTGAAAAAAA (2) TCTCACAGAA TTAAAAAAAA (2) 23 0.023