| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CATTGCTGCG GAAATATATG (2) GGCTCAAAAA TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 102.7 | 0.1027 |
| Cb medulloblastoma | GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 240.5 | 0.2405 |
| P8 GC+1d culture | GAAATATATG (2) TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2)
| 132.5 | 0.1325 |
| P8 GC+SHH+1d culture | CATTGCTGCG GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 204.9 | 0.2049 |
| 3T3 fibroblasts | TAAAAAAAAA (3) TGAAAAAAAA (2)
| 14 | 0.014 |
| E15 cortex | TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 44.5 | 0.0445 |
| P1 cortex | GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2)
| 81.8 | 0.0818 |
| Hypothalamus | CATTGCTGCG GAAATATATG (2) GCTGATGAGG (3) TAAAAAAAAA (3) TGAAAAAAAA (2)
| 173.8 | 0.1738 |
| E12.5 retina | GAAATATATG (2) TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2)
| 114.5 | 0.1145 |
| E14.5 retina | GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 173.1 | 0.1731 |
| E16.5 retina | CATTGCTGCG GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 135.7 | 0.1357 |
| E18.5 retina | GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 265.5 | 0.2655 |
| P0.5 retina | GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2)
| 66.7 | 0.0667 |
| P2.5 retina | GAAATATATG (2) TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2) TGCTCAAAAA
| 170.7 | 0.1707 |
| P4.5 retina | CATTGCTGCG GAAATATATG (2) GCTGATGAGG (3) TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2) TGCTCAAAAA
| 231.9 | 0.2319 |
| P6.5 retina | GAAATATATG (2) TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 173.4 | 0.1734 |
| P10.5 crx- retina | CATTGCTGCG GAAATATATG (2) GGCTCAAAAA TAAAAAAAAA (3) TGAAAAAAAA (2) TGCTCAAAAA
| 74.3 | 0.0743 |
| P10.5 crx+ retina | CATTGCTGCG GAAATATATG (2) GGCTCAAAAA TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2) TGCTCAAAAA
| 99.9 | 0.0999 |
| Adult retinal | CATTGCTGCG GAAATATATG (2) TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2) TGCTCAAAAA
| 57.5 | 0.0575 |
| ONL | CATTGCTGCG GAAATATATG (2) TAAAAAAAAA (3) TACCAGAAAG (2) TGAAAAAAAA (2) TGCTCAAAAA
| 88.1 | 0.0881 |