Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301039	Ncoa1	nuclear receptor coactivator 1	12	12 A2-A3	17977
Mm.301039	2610001N11Rik	RIKEN cDNA 2610001N11 gene	12		72332
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGTTATA (2) GTCTCTGCCA 4.9 0.0049 Cb medulloblastoma CAGAGTTATA (2) GTCTCTGGGC TCACCTTCAA (3) 20.8 0.0208 P8 GC+1d culture AGCTGGATTC (2) GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 10.2 0.0102 P8 GC+SHH+1d culture CAGAGTTATA (2) CAGCAGCAGA (2) GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 7.1 0.0071 3T3 fibroblasts GTCTCTGCCA TCACCTTCAA (3) 7 0.007 P1 cortex TCACCTTCAA (3) TTTATTATTT (4) 13.6 0.0136 Hypothalamus GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 10.8 0.0108 E14.5 retina CAGAGTTATA (2) GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 10.8 0.0108 E16.5 retina CAGAGTTATA (2) GTCTCTGGGC TTTATTATTT (4) 5.4 0.0054 E18.5 retina CAGAGTTATA (2) TCACCTTCAA (3) TTTATTATTT (4) 9.1 0.0091 P0.5 retina AGCTGGATTC (2) CAGAGTTATA (2) GTACCAATTA (2) GTCTCTGCCA TCACCTTCAA (3) 11.9 0.0119 P2.5 retina CAGAGTTATA (2) GTACCAATTA (2) TCACCTTCAA (3) TTTATTATTT (4) 31.7 0.0317 P4.5 retina CAGAGTTATA (2) TCACCTTCAA (3) TTTATTATTT (4) 9.9 0.0099 P6.5 retina CAGAGTTATA (2) CAGCAGCAGA (2) GTACCAATTA (2) TCACCTTCAA (3) TTTATTATTT (4) 15.1 0.0151 P10.5 crx- retina AGCTGGATTC (2) CAGAGTTATA (2) GTCTCTGGGC TCACCTTCAA (3) 16.8 0.0168 P10.5 crx+ retina CAGAGTTATA (2) CAGCAGCAGA (2) GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 22.9 0.0229 Adult retinal GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 9.4 0.0094 ONL CAGAGTTATA (2) CAGCAGCAGA (2) GTCTCTGGGC TCACCTTCAA (3) TTTATTATTT (4) 13.3 0.0133