Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301147	1700054E11Rik	RIKEN cDNA 1700054E11 gene	13		73444
Mm.301147	Btf3	basic transcription factor 3	13	13 D1	218490
Gene Ontology	nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	BTF3[basic transcription factor 3] | BTF3[basic transcription factor 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCAGGAGA (2) AACTGCTTTT (4) ACTGCTTTTT (2) 22.8 0.0228 Cb medulloblastoma ACTGCTTCTT ACTGCTTTTT (2) GGAAAAGAAA TTTACAAACC (2) 13.8 0.0138 P8 GC+1d culture ACTGCTTCTT ACTGCTTTTT (2) ATATAAAATA (2) GGAAAAGAAA TTTACAAACC (2) 33.1 0.0331 P8 GC+SHH+1d culture AAATAAAATA ACTGCTTTTT (2) ATATAAAATA (2) TTTACAAACC (2) 22.3 0.0223 3T3 fibroblasts ACTGCTTTTT (2) GTCATAGCTG (2) 28 0.028 E15 cortex ACTGCTTTTT (2) GTCATAGCTG (2) 24.7 0.0247 P1 cortex AACTGCTTTT (4) ACTGCTTTTT (2) ATATAAAATA (2) 18.1 0.0181 Hypothalamus AAATAAAATA ACTGCTTTTT (2) 7.2 0.0072 E12.5 retina AACCAGGAGA (2) ACTGCTTCTT ACTGCTTTTT (2) GGAAAAGAAA 18.9 0.0189 E14.5 retina AAATAAAATA ACTGCCTTTT ACTGCTTTTT (2) 7.2 0.0072 E16.5 retina AAATAAAATA AACCAGGAGA (2) ACTGCCTTTT ACTGCTTTTT (2) TTTACAAACC (2) 25.3 0.0253 E18.5 retina ACTGCTTTTT (2) 12.7 0.0127 P0.5 retina AAATAAAATA ACTGCTTCTT ACTGCTTTTT (2) GGAAAAGAAA GTCATAGCTG (2) 47.1 0.0471 P2.5 retina ACTGCTTTTT (2) GGAAAAGAAA GTCATAGCTG (2) 19.4 0.0194 P4.5 retina ACTGCTTCTT ACTGCTTTTT (2) ATATAAAATA (2) GTCATAGCTG (2) TTTACAAACC (2) 27.8 0.0278 P6.5 retina ACTGCTTTTT (2) GTCATAGCTG (2) 13.3 0.0133 P10.5 crx- retina AACTGCTTTT (4) ACTGCTTCTT ACTGCTTTTT (2) 24.1 0.0241 P10.5 crx+ retina AAATAAAATA ACTGCTTTTT (2) 11.5 0.0115 Adult retinal AACTGCTTTT (4) ACTGCTTCTT ACTGCTTTTT (2) ATATAAAATA (2) GTCATAGCTG (2) 16.9 0.0169 ONL ACTGCTTTTT (2) GTCATAGCTG (2) 11.4 0.0114