Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30155	Atp6v0c	ATPase, H+ transporting, V0 subunit C	17	7 2.0 cM	11984
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-translocating V-type ATPase complex | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | ion transport | lysosomal lumen acidification | membrane | protein binding | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex | transport | vacuolar acidification
Human Homolog	ATP6V0C[ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAGGTCAA CACGGGCAGC CGTCTGTGGA GCGGGGGGGG (2) 37.5 0.0375 Cb medulloblastoma ACCAGTCCCC CACGGGCAGC CGTCTGTGGA GCGGGGGGGG (2) 101.7 0.1017 P8 GC+1d culture AAGTCCATCA ACCAGTCCCC CACGGGCAGC CCCACGAACA CGTCTGTGGA GCTGACATCA (7) 85.5 0.0855 P8 GC+SHH+1d culture AAGTCCATCA AATAGGTCAA CACGGGCAGC CGTCTGTGGA GCTGACATCA (7) 43.5 0.0435 3T3 fibroblasts CACGGGCAGC CGTCTGTGGA 45.5 0.0455 E15 cortex CGTCTGTGGA 69.3 0.0693 P1 cortex CACGGGCAGC CGTCTGTGGA 122.7 0.1227 Hypothalamus AAGTCCATCA AATAGGTCAA ATCCTGATCC CACGGGCAGC CCCACGAACA CGTCTGTGGA TGTCAGGCTG 77.8 0.0778 E12.5 retina AAAGTCATCA CGTCTGTGGA GCGGGGGGGG (2) 28.2 0.0282 E14.5 retina CGTCTGTGGA TGTCAGGCTG 10.9 0.0109 E16.5 retina AAGTCCATCA CACGGGCAGC CGTCTGTGGA TGTCAGGCTG 32.6 0.0326 E18.5 retina CACGGGCAGC CCCACGAACA CGTCTGTGGA 12.7 0.0127 P0.5 retina ATCCTGATCC CACGGGCAGC CGTCTGTGGA 43.2 0.0432 P2.5 retina ACCAGTCCCC CACGGGCAGC CGTCTGTGGA 52.9 0.0529 P4.5 retina CACGGGCAGC CGTCTGTGGA 37.6 0.0376 P6.5 retina AAAGTCATCA AATAGGTCAA CACGGGCAGC CGTCTGTGGA GCGGGGGGGG (2) 75.1 0.0751 P10.5 crx- retina AATAGGTCAA ACCAGTCCCC ATCCTGATCC CACGGGCAGC CGTCTGTGGA GCTGACATCA (7) 117.2 0.1172 P10.5 crx+ retina AAAGTCATCA ATCCTGATCC CACGGGCAGC CCCACGAACA CGTCTGTGGA GCGGGGGGGG (2) 124.8 0.1248 Adult retinal ACCAGTCCCC CACGGGCAGC CGTCTGTGGA 92.7 0.0927 ONL AAAGTCATCA AATAGGTCAA ACCAGTCCCC CACGGGCAGC CGTCTGTGGA TGTCAGGCTG 49.7 0.0497