| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAATTTTTTT (2)
| 9.8 | 0.0098 |
| Cb medulloblastoma | TAATTTTTTT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CACACAAACA TAATTTTTTT (2) TCCGGGGACC
| 34.2 | 0.0342 |
| P8 GC+SHH+1d culture | TAATTTTTTT (2) TAGCAAAGTT TCCGGGGACC
| 29.3 | 0.0293 |
| 3T3 fibroblasts | TCCGGGGACC
| 3.5 | 0.0035 |
| P1 cortex | GGAATGATTA TAATTTTTTT (2) TAGCAAAGTT
| 36.3 | 0.0363 |
| Hypothalamus | CACACAAACA TAATTTTTTT (2) TCCGGGGACC
| 16.3 | 0.0163 |
| E12.5 retina | TAATTTTTTT (2)
| 9.4 | 0.0094 |
| E14.5 retina | GGAATGATTA TAATTTTTTT (2) TAGCAAAGTT
| 20 | 0.02 |
| E16.5 retina | TAATTTTTTT (2)
| 9.1 | 0.0091 |
| E18.5 retina | TAATTTTTTT (2) TAGCAAAGTT
| 25.4 | 0.0254 |
| P0.5 retina | TAATTTTTTT (2)
| 13.7 | 0.0137 |
| P2.5 retina | CACACAAACA GGGAAGGAGA (2) TAATTTTTTT (2)
| 23 | 0.023 |
| P4.5 retina | TAATTTTTTT (2)
| 13.9 | 0.0139 |
| P6.5 retina | TAATTTTTTT (2) TCCGGGGACC
| 3.4 | 0.0034 |
| P10.5 crx- retina | GGGAAGGAGA (2) TAATTTTTTT (2)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GGGAAGGAGA (2) TAATTTTTTT (2) TCCGGGGACC
| 9.6 | 0.0096 |
| Adult retinal | GGAATGATTA TAATTTTTTT (2)
| 3.8 | 0.0038 |
| ONL | TAATTTTTTT (2)
| 3.8 | 0.0038 |